Riemerella anatipestifer ATCC 11845 = DSM 15868: RA0C_0407
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Entry
RA0C_0407 CDS
T02107
Name
(GenBank) isocitrate dehydrogenase, nADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
rai
Riemerella anatipestifer ATCC 11845 = DSM 15868
Pathway
rai00020
Citrate cycle (TCA cycle)
rai00480
Glutathione metabolism
rai00720
Other carbon fixation pathways
rai01100
Metabolic pathways
rai01110
Biosynthesis of secondary metabolites
rai01120
Microbial metabolism in diverse environments
rai01200
Carbon metabolism
rai01210
2-Oxocarboxylic acid metabolism
rai01230
Biosynthesis of amino acids
rai04146
Peroxisome
Module
rai_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rai_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
rai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RA0C_0407
09102 Energy metabolism
00720 Other carbon fixation pathways
RA0C_0407
09106 Metabolism of other amino acids
00480 Glutathione metabolism
RA0C_0407
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RA0C_0407
Enzymes [BR:
rai01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
RA0C_0407
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
AFD55390
UniProt:
E4T8V8
LinkDB
All DBs
Position
complement(372739..374955)
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AA seq
738 aa
AA seq
DB search
MSTAKIYYTLTDEAPMLATHSFLPIVKAFAKSADIQIEVPDISLSGRILANFPEVLTEEQ
RIPDALSQLGELATKPEANIIKLPNISASIPQLNEAIEELQKKGFNVPNYPAEPKTEEEK
EIKAKYAKVLGSAVNPVLREGNSDRRAPKAVKNYAKANPHRMGEWKSDSKTDVAHMNQGD
FYGTETSTTVEKDGKFKIVFFGNDGSEKVLKDYASLQAGEIIDSSVMNIKALKTFVKEAI
QEAKSRNVLLSAHLKATMMKVSDPIIFGAIVETFFQEVFEKYAETFKSLDVNPNDGLASL
YDKIAGIAQEADIKVDIEHVLNESSRVAMVNSDKGITNFHVPSDVIVDASMAALVRGGGK
MWNKDGQEEDTLAIIPDRSYAGFYQAVIDDMKANGKLDPTTMGSVPNVGLMAKKAEEYGS
HDKTFQMEAEGTVKVLNENNEVLLEQKVETGDIFRMCQTKDAPIQDWVKLAVNRSRLSDT
PAIFWLDKGRAHDREVIKKVEQYLKNYDTQGLDIKILDVKDAMSETLKRAREGKDTISVS
GNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHIEQFIEEGYLRWD
SLGEFLALQASLEHLAQTQNNTKAQVLADALDEANAKFLANDKSPARKIGSIDNRGSHFY
LALYWAEALAAQTQDSELSTLFQPIAKEMQENEAKINEELIASQGKAQDIEGYYRPNEDK
TYAAMRPSVTLNQIIDRI
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagctaaaatttactacacccttacagatgaggctcctatgttagctactcat
tcatttttacctattgtaaaagcatttgcaaaatcagcagacatacagatagaagtaccg
gatatttctttatcagggagaatattggctaactttccagaggttcttactgaagaacaa
agaattcctgatgctttgtctcaattaggagaattagctacaaaaccagaagctaacatt
attaagttgcctaatatttcagcttctatacctcagcttaacgaggctatagaggaacta
cagaaaaaagggttcaatgtacctaattatcctgcagaaccaaaaacggaagaagaaaaa
gaaattaaagctaaatatgctaaggtacttggttcggctgtaaaccctgtgcttagagag
gggaattctgacagaagagctcctaaggctgttaaaaattatgcaaaagccaatcctcat
agaatgggcgaatggaagtctgatagtaaaacagatgtagctcatatgaaccaaggagat
ttctacggtactgaaacttctacgactgtagagaaagatggtaagtttaaaattgtattc
tttggaaatgacggttcagaaaaagtactaaaagattacgcttctcttcaagcaggagaa
attatagactcgtctgtgatgaacatcaaagccttaaaaacttttgtaaaagaggcgata
caagaagctaaaagtagaaatgtattgctttctgctcatttaaaggcaactatgatgaag
gtgtctgaccctattattttcggagctattgttgaaacattcttccaagaagtatttgaa
aagtatgcagaaacattcaaatcattagatgttaatcctaacgatggactggcaagtctt
tatgataaaattgcaggaattgctcaagaagctgatataaaagttgatatagagcatgtt
ctaaacgaaagttctagagtagcaatggtcaactcggataagggaattactaacttccac
gttcctagtgatgttattgtagatgcttctatggcggcattagttcgtggtggcggtaaa
atgtggaataaagatggacaagaggaagatactttagccataattccagaccgttcttat
gctggtttctatcaagctgtaatagatgatatgaaagctaacggaaagttagaccctact
actatgggtagtgtacctaatgtaggactaatggctaaaaaggcagaagagtacggttct
cacgataagactttccaaatggaagcagaaggtactgtaaaagtccttaatgaaaacaac
gaagttttattagaacaaaaggtagaaacgggagatattttcagaatgtgtcaaactaaa
gatgctcctatacaagattgggttaaattagcggttaaccgttctcgcttatcggatact
ccagctatattttggttagataaaggtagagctcacgatagagaagttatcaaaaaagta
gaacaatatcttaaaaattacgatacacaagggcttgatattaaaattttagatgttaaa
gacgcaatgtctgaaactcttaaaagagctagagaaggtaaagacactatttctgtatct
ggcaatgttcttagagattatcttacggatttattccctatcctagagttaggaacctcg
gctaagatgttgtctattgtacctcttatgaacggtggtgggctatttgaaacaggtgca
ggaggttctgctcctaaacatatagagcagtttatagaagaaggctatttacgttgggat
tctttaggagaatttttagcattacaggcaagtttagaacacttagcacaaactcaaaat
aatacgaaggctcaagtattggcagatgcactagatgaagctaatgccaagtttttagct
aatgacaaatctccagctagaaaaataggaagcatagataatagaggttctcatttttat
ttagcgttatattgggcagaagctttagcagcacagactcaagattcagagttatctact
ctgtttcaacctattgctaaagaaatgcaagaaaatgaggcgaaaatcaatgaagagctc
atcgcttctcaaggtaaagcccaagatattgaaggctactatcgtccgaacgaagataaa
acttacgctgcaatgcgtccttcggtaacacttaatcaaattattgatagaatataa
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