Riemerella anatipestifer ATCC 11845 = DSM 15868: RA0C_0416
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Entry
RA0C_0416 CDS
T02107
Name
(GenBank) DNA polymerase i
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rai
Riemerella anatipestifer ATCC 11845 = DSM 15868
Pathway
rai03030
DNA replication
rai03410
Base excision repair
rai03420
Nucleotide excision repair
rai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RA0C_0416
03410 Base excision repair
RA0C_0416
03420 Nucleotide excision repair
RA0C_0416
03440 Homologous recombination
RA0C_0416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rai03032
]
RA0C_0416
03400 DNA repair and recombination proteins [BR:
rai03400
]
RA0C_0416
Enzymes [BR:
rai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RA0C_0416
DNA replication proteins [BR:
rai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RA0C_0416
DNA repair and recombination proteins [BR:
rai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RA0C_0416
NER (nucleotide excision repair)
GGR (global genome repair) factors
RA0C_0416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
RNase_H_2
ACS_CODH_B_C
Reoviridae_Vp9
Motif
Other DBs
NCBI-ProteinID:
AFD55397
UniProt:
E4T8W8
LinkDB
All DBs
Position
388668..391475
Genome browser
AA seq
935 aa
AA seq
DB search
MTENTDKKLYLVDAYAMIFRGYYAFIRNPRLTTGGLDTSAIYGFTNSLIELIKKERPTHL
AVVFDVGRQNVRHEDFSDYKANRAETPEAIKIAVPYIHRILKAMHIPILGVEGYEADDVI
GTIAGKAEKQGYEVFMVTPDKDFAQLVTEHIKIYKPGLKGGDVEILGVKEVLEKYEIENP
KQIIDYLGMMGDSVDNIPGLEGVGEKTAKKFIKEYGSMENLLANTHQLKGKLREKVEASA
ERGLMSKKLATILCDAPIEFHQEEYDLETPNFEEVKQIFEEIEFRRLYENLYKAFSTENS
AEEKKSDKDSVQSPVQLDLFSDFEALEQATTTKHTIEDREHLYQYIDTEKGQLLLLQNLL
KQKAVCFDTETTSLDEMEAELIGISFSYKKGLAYYVPIPENRAEAQAIVERFRPFFEKES
ILKIAHNLKYDYKVLLNYGIEVTGNLFDTMIAHYLLNPDGRHGMDYLSEMYLNYKPIALE
TLIGKKGKGQKTLREIDLPTQTQYAAEDADITFQLYEIFSPQLKKEEVEEVFYKIEMPLV
KVLAKMELTGVALDEEWLKDESISLEQDLKILEGQIFEQAGEEFNINSPKQLGDILFEKL
KLDPKAKKTKTGQYSTSEDVLQKLSHKHEIIKLILEYRQLQKLKSTYVDALPNQISPIDG
RVHTSFAQTVAATGRLASNNPNLQNIPIRTERGQQVRGAFVAPKGSKIVSADYSQIELRL
IAEISGEETMIKAFKEGQDIHASTASKLFDVPLNEVSKTQRSQAKTVNFGIIYGQSAFAL
ADQTGLSRTDAKQLIDSYYETYPKLKAFMTEQVQVARKKGYVETIMGRKRHLKDINSNNF
VVRGHAERNAVNAPIQGSAADIIKLAMIKIDSEIKAQGLKTKMLLQVHDELVFEVPNEEI
EVATTLIKQEMETAYSTKVPLLTEVGVGDNWLEAH
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaacaccgataaaaaactgtatcttgtagatgcctacgcaatgatttttaga
ggctactatgcctttatcagaaatcctagacttaccactggtggattagacacttccgct
atctatggttttactaactctcttattgagttaattaaaaaggaacgccctacacattta
gcagtcgtttttgatgtgggaaggcaaaatgtaagacacgaagatttttctgactataaa
gccaacagagccgaaactccagaggctataaaaattgcggtgccttacattcatcgtatt
ttaaaggcaatgcatatcccaattttaggagtagagggctacgaggcagatgatgttata
ggtactattgcaggcaaggcagagaagcaaggttacgaggtatttatggtaacgccagat
aaagattttgcacaactcgttacagagcatataaaaatctataaaccagggttaaaaggt
ggcgatgttgaaatcttaggcgtaaaggaagttttagaaaaatacgaaatagaaaaccct
aagcagattatagattatctaggaatgatgggcgactcggtggataatattcctgggctt
gaaggagtgggagaaaagaccgcaaaaaaattcatcaaggagtatggctctatggaaaac
cttctggccaatactcatcagcttaaagggaaattaagagaaaaggtggaagcctccgca
gagcgtggtcttatgtcaaaaaaactagccactatactttgtgatgctcccatagagttt
catcaagaggagtacgatttagaaacacctaactttgaagaagtaaaacaaatttttgaa
gagatagaattccgaagattgtacgaaaatctttacaaagccttctctacggaaaattcg
gcagaggaaaaaaaatcggataaagattctgttcagtcgccagtacagttagatttattt
tcagattttgaagcattagaacaagctacaactaccaaacataccatagaagaccgagag
catctctatcaatatatagatacagaaaaaggtcagcttttgctcctacaaaatctattg
aaacaaaaagcggtttgttttgatacagaaaccacctctttagatgagatggaagcagag
cttataggcattagtttcagttataaaaaaggcttggcttattacgttccaatccctgaa
aatagagcggaggcacaggctattgtagagcgttttcgtccgttttttgaaaaggaaagc
atcttaaaaattgctcataatctaaaatatgactacaaggtactcctaaattacggtata
gaagttacaggtaatttatttgatacaatgattgcccactacttgctcaatcctgatggc
agacacggcatggattatctttcggaaatgtaccttaactataagcctatagcattagaa
actttaattggcaaaaaaggaaaagggcaaaaaacattacgagaaattgacttaccaaca
caaacacaatacgccgcagaagatgctgatattacctttcaattgtacgaaattttttcg
cctcaattaaaaaaagaagaggtagaagaggtattttataagatagaaatgcctttagtt
aaagtcttagctaaaatggaactaacgggcgtagctttagatgaagaatggctaaaagat
gaaagtattagcttggagcaagatttaaaaattttagaaggacaaatatttgaacaggcg
ggagaagagtttaatattaactctcctaaacagttaggagatatattatttgaaaaatta
aaattagaccctaaagctaagaagacgaaaacaggacagtattccacttcggaagatgtt
ttgcaaaaactttctcataaacacgagattatcaagttaattttggaataccgccaatta
caaaagctaaaatctacttatgtagatgctttgccaaatcaaatcagtccaatagatggc
agagtgcataccagctttgcccaaacggtagccgctacaggaagactggctagtaataat
cctaatttacagaatatccctataagaacggaacgaggacaacaggtaagaggtgctttt
gtagctccaaaaggttctaaaattgtttcagcggattattctcaaatagaacttcgtctt
attgcagaaatttctggagaggaaacaatgataaaggcatttaaggaggggcaggacatt
cacgcttctacggcttccaaattatttgatgttcctttgaatgaagtgtctaaaactcaa
agaagccaagctaaaacagttaattttggtattatttatggacaaagtgctttcgcttta
gcagaccaaacaggtctttctagaactgatgctaaacaactcatagactcctattacgaa
acttatccaaagttaaaagcctttatgacagagcaagttcaagtggctagaaaaaaaggc
tatgtagaaactatcatgggaagaaaaagacaccttaaagatataaactctaacaatttt
gtagtaagaggacatgcagaaagaaatgctgtaaacgccccaatacaaggtagtgctgct
gatattataaaactggcaatgataaaaatagattctgaaataaaagctcaaggtttaaaa
accaaaatgcttttacaggtacacgatgaattggtatttgaagttccaaatgaagagata
gaagttgcgactactttaataaaacaagaaatggaaactgcttattccactaaagtacca
ttgcttacagaggttggggtaggagataattggctagaagctcattaa
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