Riemerella anatipestifer ATCC 11845 = DSM 15868: RA0C_0913
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Entry
RA0C_0913 CDS
T02107
Name
(GenBank) RNA polymerase, sigma 70 subunit, rpod subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
rai
Riemerella anatipestifer ATCC 11845 = DSM 15868
Pathway
rai02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rai00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RA0C_0913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rai03021
]
RA0C_0913
Transcription machinery [BR:
rai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RA0C_0913
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r1_2
PgaD
Sigma70_r4_2
DUF6285
DUF7443
Motif
Other DBs
NCBI-ProteinID:
AFD55851
UniProt:
E4TBL1
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All DBs
Position
complement(890257..891123)
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AA seq
288 aa
AA seq
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MRQLKITKQVTNRETASLDKYLQEIGKVDLITADEEVELAQKIRAGDKVALEKLIKANLR
FVVSVSKQYQNQGLSLPDLINEGNLGLMKAAKRYDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKAYAHLEQENERPPSPEELAEVLDMSEEDIKESMKNSGRHL
SMDAPLVEGEDSNLYDVLRSGESPSPDKELMLESLQIEIERALQTLTPREADLVRLYFGL
NGKHPMTLEEIGETFDLTRERVRQIKEKAIKRLKHNSRSKILKSYLGK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagacaacttaaaattaccaagcaggttaccaatagggaaacggcatcattagataag
tatttgcaagagataggtaaagtagacctaattactgcagatgaggaggtagaattggca
caaaagattcgtgctggggataaggttgctttagaaaagctaatcaaagccaaccttcgt
ttcgtagtttctgtgtctaaacaatatcaaaatcaaggcttgtcattaccagatttaatc
aacgaaggtaatttaggattgatgaaagccgctaaaagatatgacgaaacgagaggtttc
aaatttatatcttatgcggtgtggtggattagacaatctatcttacaggctttagcagag
cagtctagaatcgttcgtttaccattgaacaagattgggtcaatcaataaaattaacaaa
gcatacgctcatttagagcaagagaatgaaagaccgccttcaccagaagaattagctgaa
gttctagatatgagtgaggaggatattaaagagtctatgaaaaacagcggaagacacctt
tctatggacgctccgctggtagaaggagaagactctaacctttacgatgttcttcgttca
ggggaatctcctagcccagacaaagagttgatgctagaatctttacaaatagagattgaa
agagcattacaaacacttacgcctagagaagcagatttagtaaggctttacttcgggctt
aacggcaaacaccctatgactttagaggaaataggcgaaacttttgaccttacgagagag
cgtgttcgtcagattaaagaaaaggctatcaaaaggttaaaacacaactcaagaagtaag
attttgaagtcttatttaggaaaataa
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