Riemerella anatipestifer ATCC 11845 = DSM 15868: RA0C_1000
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Entry
RA0C_1000 CDS
T02107
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rai
Riemerella anatipestifer ATCC 11845 = DSM 15868
Pathway
rai00260
Glycine, serine and threonine metabolism
rai00460
Cyanoamino acid metabolism
rai00630
Glyoxylate and dicarboxylate metabolism
rai00670
One carbon pool by folate
rai00680
Methane metabolism
rai01100
Metabolic pathways
rai01110
Biosynthesis of secondary metabolites
rai01120
Microbial metabolism in diverse environments
rai01200
Carbon metabolism
rai01230
Biosynthesis of amino acids
rai01240
Biosynthesis of cofactors
rai04981
Folate transport and metabolism
Module
rai_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RA0C_1000
09102 Energy metabolism
00680 Methane metabolism
RA0C_1000
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RA0C_1000
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RA0C_1000
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RA0C_1000
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RA0C_1000
Enzymes [BR:
rai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RA0C_1000
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AFD55933
UniProt:
E4TA30
LinkDB
All DBs
Position
complement(981000..982268)
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AA seq
422 aa
AA seq
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MRDVIFDLIEQERARQTHGIELIASENFVSDEVMKAMGSVLTNKYAEGYPGRRYYGGCEV
VDEVEKLAIDRAKQLFGVEYANVQPHSGSQANAAIYLACLKPGDTILGLDLSMGGHLTHG
SFVNFSGIQYNAQFYGVERETGLIDYEAMRQKALEVKPKLIIAGYSAYSRDLDYAKFREV
ADEVGATLWADIAHPAGLVAKGLLSSPFPYCDVVTTTTHKTLRGPRGGLIMLGKDFENPY
GHKTPKGETKMMSAVLDSAVFPGIQGGPLEHVIAAKAVAFGEAIDGKFETYAKQVVANAR
ALANALIDRGFEIVGGGTDNHLMLVDLRNKGVNGKETEKALVKADITCNKNMVPFDDKSA
FITSGIRLGTPAITTRGLKENDMDSVAELISKVVSNLNNDSVLEEVKKQVNDLMSSRPLF
QY
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagagatgtaatttttgatttgatagagcaagaaagagcacgccaaacacatggtata
gagctaattgcttctgaaaactttgtttctgatgaagtgatgaaagctatgggaagtgtt
cttactaataaatatgctgaaggctatccaggaagacgctactatggtggttgtgaggtt
gttgatgaagtagagaaattagcgatagatagagcaaaacaactatttggagtagaatat
gctaacgttcagccacattctggttcgcaagctaatgcagctatctatttagcgtgtctt
aaacctggagatacaatattgggattagatttatcaatgggagggcatttaacgcacggc
tcgtttgtcaacttttcaggaatacaatacaatgcacagttctatggtgtagaaagagaa
acagggctgatagattacgaagctatgcgtcagaaagccttagaagtaaagccaaaactt
attatagcaggatattcggcgtattctcgtgatttagattatgctaaatttcgtgaggta
gcagatgaggtaggagctacactttgggcagatattgcacaccctgcaggattggttgct
aaaggtttattaagttctccgtttccttactgcgatgtggtaactactactacacataaa
actttaagaggacctagaggaggtttgataatgttaggtaaagattttgaaaacccttat
ggtcataaaacgcctaaaggggaaaccaaaatgatgagtgcagtactagatagtgcggta
tttccagggatacaaggcggtccgctagagcatgtaatagcggctaaagcagtagctttt
ggagaggcgatagatggtaaatttgaaacctacgctaaacaagtagtggctaatgcaagg
gctttggctaatgctttaatagatagagggtttgaaatcgtaggtggaggaacagataat
catcttatgttggtagaccttcgtaataaaggtgttaacggtaaggagacagaaaaagcc
ttagtaaaagcagatattacttgtaataagaatatggtgccgtttgatgataaatcagcg
ttcattacttcgggcatcagattgggaactcctgcaattaccactagaggacttaaagaa
aacgatatggattccgtagctgaactaatttctaaagtggtttctaatcttaataatgat
tctgttttagaagaggttaaaaagcaagtgaatgatctgatgtctagtagaccgttattt
cagtactaa
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