Riemerella anatipestifer ATCC 11845 = DSM 15868: RA0C_1016
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Entry
RA0C_1016 CDS
T02107
Name
(GenBank) protein translocase subunit yidc
KO
K03217
YidC/Oxa1 family membrane protein insertase
Organism
rai
Riemerella anatipestifer ATCC 11845 = DSM 15868
Pathway
rai02024
Quorum sensing
rai03060
Protein export
rai03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RA0C_1016
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RA0C_1016
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RA0C_1016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
rai03029
]
RA0C_1016
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rai02044
]
RA0C_1016
Mitochondrial biogenesis [BR:
rai03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
RA0C_1016
Secretion system [BR:
rai02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RA0C_1016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
60KD_IMP
YidC_periplas
Oxidored_q3
DUF6500
Motif
Other DBs
NCBI-ProteinID:
AFD55948
UniProt:
E4TBP6
LinkDB
All DBs
Position
complement(1000809..1002599)
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AA seq
596 aa
AA seq
DB search
MMQQNNGLDKNQLIGFVVFTLFLLGVMLYFQKQQTGQEQQQVATEQKVGATNNIVKATNL
PVKANEIQKVSLKNDKISVEFSGLGGQISSLLMNNYKAYNKKTNQNDLPLYLIERNNSSY
GFKFKDKSGKEINTKDLVFTSQVNGNTVTMTSVLNGGAIVQFIYTLKDYQVDFQVATKGL
SSIVSGDKASFVWNYTPKEQEKGRAQEQQHTEFVYAFNNYKSTDYDARTSMDETKEVLNW
LAVKQQFFTPIIEAKNGFKNSTGHQDMIEEGEYLKKFDFNGELEITGGEFNQSFSWYFLP
LDLKLLKTFDKNFDEIIPLGWSFIGTMNRWIFIPMYNMISSWGIAAGWVIFLMTILVKVV
LSPIMYKQHKLSAMMKVIRPEIEEVNAKLKDADPMKKQQAVMEVYRKAGVNQLAGCLPAL
LQIPIFYALFRFFPNMLDLRGKGFWFATDLTAYDDLIKLPFHIPFLGEHISIFALACTAV
LLIYTVMTAGNMQQPTQEGMPNMKPLMYIFPVMFLFFLNSAASGLSWYYFVSNGINIIII
LVIKYWILDEKTIHAQIQANKAKPKKEGKFQKRMREMMEKAQEQQRLQEQQRAKRK
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaacagaataatggattagacaaaaatcagttaattggttttgtggtatttact
ctatttttattaggagtaatgttatactttcaaaagcaacagactgggcaagagcaacaa
caagttgccacagagcagaaggtaggagctactaacaatattgtaaaagccaccaatctg
cctgttaaagctaacgaaatacaaaaagtaagccttaaaaatgataaaatatcggtggag
tttagtggacttggaggtcagatttcttctctattgatgaataattataaagcttataat
aagaaaaccaaccaaaatgacttaccattatatcttatagagcgtaataattcttcgtat
ggttttaaatttaaagataaatcaggcaaagagattaacaccaaagatttggtgtttacg
tctcaagttaatgggaatacggtaactatgacgagtgtcttaaacggtggagctattgta
cagtttatttatactttaaaagattatcaggttgattttcaagtagcgactaaagggttg
tcgtctattgtttctggagataaagcaagtttcgtttggaactatacacctaaagagcag
gaaaaaggtagagctcaggagcaacaacatacagagtttgtttacgcttttaataattat
aaaagcaccgactatgatgccagaacttctatggacgaaactaaagaagttttaaattgg
ttagcggttaaacagcagttttttacacctattatagaagccaagaatgggtttaaaaac
tccacaggtcatcaggatatgattgaggaaggggaatatcttaagaaatttgatttcaac
ggagagttggaaattacaggaggagaatttaatcaaagtttttcgtggtactttttgccg
ttggatttaaaattattaaagacttttgataagaactttgatgaaatcattcctcttggt
tggtcttttataggaacaatgaaccgttggatatttatccctatgtataatatgatttca
tcttggggaatagctgcaggttgggtaattttcctaatgacgattttggttaaagtggta
ctttctccaattatgtacaaacaacataagttgagtgcaatgatgaaagtgattcgtcct
gaaatagaggaagtaaatgccaaactcaaagacgccgatccaatgaagaagcaacaagca
gtgatggaggtgtatagaaaggctggtgttaatcagttagcagggtgtttaccagcattg
ttacaaattcctatattctatgcactattccgtttcttccctaatatgttagatttaaga
gggaaaggcttctggtttgcaaccgacttaacagcttatgatgatttaataaaattacca
tttcatattccatttttgggagagcatatcagcatttttgctttggcttgtacggcggta
ttattgatatatacagtgatgacagcaggtaatatgcaacaaccaacgcaggaaggtatg
cctaatatgaagcctttgatgtatattttcccagtaatgttcttgtttttcttgaactct
gcggcatcaggattatcttggtattactttgtatctaacggtatcaatattatcattatc
ctagtgattaagtactggattttagatgaaaaaacaatccatgcacagattcaagctaac
aaagcgaagcctaaaaaggaaggtaagttccaaaaaaggatgcgtgaaatgatggaaaaa
gctcaagaacaacaaagattgcaggagcaacagagagctaaacgcaaataa
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