Riemerella anatipestifer ATCC 11845 = DSM 15868: RA0C_1022
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Entry
RA0C_1022 CDS
T02107
Name
(GenBank) succinate dehydrogenase or fumarate reductase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rai
Riemerella anatipestifer ATCC 11845 = DSM 15868
Pathway
rai00020
Citrate cycle (TCA cycle)
rai00190
Oxidative phosphorylation
rai00650
Butanoate metabolism
rai00720
Other carbon fixation pathways
rai01100
Metabolic pathways
rai01110
Biosynthesis of secondary metabolites
rai01120
Microbial metabolism in diverse environments
rai01200
Carbon metabolism
Module
rai_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rai_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RA0C_1022
00650 Butanoate metabolism
RA0C_1022
09102 Energy metabolism
00190 Oxidative phosphorylation
RA0C_1022
00720 Other carbon fixation pathways
RA0C_1022
Enzymes [BR:
rai01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RA0C_1022
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
GIDA
Pyr_redox_2
NAD_binding_8
FAD_binding_3
RnlA_toxin_N
Thi4
Lycopene_cycl
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
AFD55953
UniProt:
E4TBQ1
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All DBs
Position
complement(1007534..1009546)
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AA seq
670 aa
AA seq
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MSILDSKIPAGPLADKWKNHKNHMNLVAPNNRDKIDVIVVGTGLAGGSAAATLAEQGYNV
KAFCYQDSPRRAHSIAAQGGINAAKNYQGDGDSIYRLFYDTIKGGDYRAREANVYRLAEV
SANIIDQCVSQGVPFGRDYGGQLDNRSFGGVQVKRTFYAKGQTGQQLLLGAYSAMSRQIG
KGRIKMYNRHEMMELVIVDGKARGIIARNLVTGEIERHSAHAVVIASGGYGNVYFLSTNA
MGSNCSAAWKIHKKGAYFANPCFVQIHPTCIPVHGTQQSKLTLMSESLRNSGRIWVPKKI
EDAVAIREGKLRPENIKEEDRDYYLERRYPAFGNLVPRDVASRAAKERCDAGFGIENNET
KEGVYLDFSTEIMKKGKEAALERNLHNPTEQQIYDLGKAWVEEKYGNLFQMYEKITADNP
YKTPMKIYPAVHYSMGGVWVDYNLMSTIPGCFVIGEANFSDHGANRLGASALMQGLADGY
FVLPYTIADYLSADIRTGQIPTDTPAFEEAEKEIQEKVNFFINNNGTHSVDYFHKKLGNV
MWNKVGMARNEQGLKEAIQEIEEIRKDFWQNVRVPGEANGMNPELEKAFRVADFLELGQL
MAMDALNRNESCGGHFREEYSTPDGEAQRDDENYKYAAVWEYKGEDINQEVLHKEELVYE
NIEVKTRSYK
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagtatattagattctaaaattccagcaggtccattggcggacaagtggaaaaatcat
aaaaatcacatgaacctagtagcccctaacaaccgtgataagatagatgttatcgtggta
ggaacagggttagcaggtggttctgctgcagctactttagcagagcagggttataatgtg
aaggcgttctgttatcaagattctcctagaagagctcactctattgcggctcaaggaggt
attaacgccgctaaaaactatcagggagacggagactctatctaccgattattctacgat
actattaaagggggagactaccgtgctagagaggctaacgtttatcgtctagcagaagtt
tctgctaatattatagaccaatgtgtttctcaaggggttccttttggtagagattacgga
ggtcaattggacaaccgttcttttggtggggttcaggtaaagagaactttctatgctaaa
ggacaaacaggtcagcaacttctactaggagcttattctgcgatgagccgtcaaataggt
aaaggtagaattaaaatgtacaaccgccatgaaatgatggagttggtaattgttgacgga
aaagcaagagggattattgcgagaaacctagtaactggggagatagaaagacactctgca
cacgcagtagttattgcttctggaggttatggtaatgtttatttcctttctacaaatgct
atggggtctaactgttctgcagcttggaaaatccataagaaaggggcctactttgcaaac
ccttgtttcgttcagatacatcctacttgtattcctgttcacgggacacagcaatctaaa
ttgacgttgatgtctgagtctttaagaaactctggtagaatatgggttcctaaaaagata
gaagatgctgtagccattagagaaggtaaactaagacctgaaaatatcaaagaagaagat
agagattattatttagaaagaagatatccagcgtttggtaacctagtgcctcgtgatgtg
gcttctagagcggctaaagagcgttgtgatgctggttttggtatcgaaaataacgaaact
aaggaaggggtttacctagacttctctaccgaaataatgaagaaaggtaaagaagcggct
ttggaaagaaacctacataatcctacagagcaacaaatctacgatttaggtaaagcttgg
gtagaagagaagtatgggaacttattccaaatgtacgaaaagattacagcggataatccg
tacaaaacaccaatgaagatttatccagcggtacactattctatgggtggtgtttgggta
gattataacttgatgtccacaataccaggttgtttcgtgattggagaagctaacttctca
gaccacggtgctaatagacttggagcttctgctctaatgcaaggtttagcagatgggtac
ttcgtattgccttatacaattgcagattatctttctgcggatattagaacagggcaaatc
cctacagatacaccagcttttgaagaggcagagaaagagatacaagagaaagttaatttc
ttcatcaataataacggaactcactctgtagattatttccacaaaaaattaggaaatgta
atgtggaataaggtgggtatggctagaaacgagcaaggcttgaaggaagctatccaagaa
attgaagaaattagaaaagatttttggcaaaatgtaagagttccaggtgaagctaatggt
atgaaccctgaactagaaaaggcattccgtgtagcggatttcttagagctaggtcagctt
atggcaatggacgcacttaacagaaacgaatcttgcggaggacacttccgtgaagaatat
tctactccagacggagaagcacagagagatgatgagaactataagtatgctgcagtttgg
gaatacaaaggagaagacatcaatcaggaagtcttacacaaagaagaactggtttacgag
aatatagaagtgaaaacaagaagttataaataa
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