KEGG   Riemerella anatipestifer ATCC 11845 = DSM 15868: RA0C_1034
Entry
RA0C_1034         CDS       T02107                                 
Name
(GenBank) putative BCR
  KO
K09952  CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
Organism
rai  Riemerella anatipestifer ATCC 11845 = DSM 15868
Brite
KEGG Orthology (KO) [BR:rai00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rai02048]
    RA0C_1034
Prokaryotic defense system [BR:rai02048]
 CRISPR-Cas system
  Type II CRISPR-Cas system
   Type II signiture cas proteins
    RA0C_1034
SSDB
Motif
Pfam: RuvC_III HNH_4 Cas9_a
Other DBs
NCBI-ProteinID: AFD55963
UniProt: H8MA21
LinkDB
Position
complement(1023494..1026931)
AA seq 1145 aa
MKTILGLDLGTNSIGWALVKETENSNEKSEIIKLGVRVNPLTVDEKTNFEAGRPLSTNAD
RTAKRSARRNLQRYKLRRKNLIDLLIKHRLIDKDTPLTEIGKNTTHQTLELRAKAARERI
ELEDLARVFLAINKKRGYRSSRKVNNEEEGQVVDGMAVAKKLYDENLTPGQYAYELLSKG
KKYVPDFYRSDLQAEFDSIWEYQKQFYADILDDELYNALKGQGQQNSRKRFLAIKGVYTA
ENKGKRDEVKLQHYKWRSEAITQKLSIEEVAYVLVEINNDLNKSSGYLGAISDRSKELYF
NKETVGENLWKQIQKNPHTSLKNQVFYRQDYLDEFEQIWETQAQFHPQLTLALKEQIRDV
VIFYQRKLKSQKGLLSFCQFESWEIERKDENGNVILNKTTQLPKRQTVGRRVAPKSSPLF
QEFKIWQNINNLEIAKISDGNSKNKKETEALSDDERKLLFEELNLRGNLSQKEVLQILGL
KDKEYKTNFPEGLEGNRTNAALFNIYQQIAENEGYGDWTKKSAQEIKEELKAVFPQIGIQ
ADILDFNAELDGKEFENQASYQLWHLLYSAEEDDKINEEDQIIYGNSAVSLKKKLCEKFG
FTPEYAKWIANVSLQDDYGNLSTKAMRKIIPYLIDGNDYSEACALAGYNHSNSLTKEEND
NRERLNKLELLPKNSLRNPVVEKILNQMVNVVNQVIETYGKPDEVRIELARELKKSAEER
AEMTKGINEATRRNEDIKKLITKNFGIPNPTKNDVVRYRLWEELAPLAYKDVFTGRQIKK
EDLFSSKIDIEHIIPKALLFDDSFSNKTLAFRETNLKKADRTAYGFIESDYNATLDDYIQ
RVETLYNNAKGTISKGKRNKLLMAQKNLPDGFIERDLRNSQYIAKKAKSMIEKVFNDVNV
TSGSITDRLREDWDLINVMKELNFPKYKALGLTEIEERYDIGQEKTKKVEVITDWTKRND
HRHHAMDALTVAFTTKSHVQYLNNLNTIHSLKGDEVDLELSKLYGLKNTITEVVNKKRKF
IPPMPNFREEAKKHIETILVSIKNKNKVYTKNINKTKKESGYHTKEQLTPRGQLHKETVY
GKSKRPMNKPTKINKNFSLEQAQLIINVQEKELVLRHLAQFDNNPAVAFDTKTLKKCHYL
KMVNL
NT seq 3438 nt   +upstreamnt  +downstreamnt
atgaaaaccatacttggattagacttaggaaccaactctatcggttgggcgttggttaaa
gaaacagagaattcaaatgagaaatctgaaattattaagttaggcgttcgtgtaaatcct
ctaacggtggatgaaaaaacaaattttgaagcagggagacccttatccaccaatgccgat
agaacagctaaaagaagtgcaagaagaaatttacaacgttataaactcagaagaaaaaat
ttaatagacttgttgattaaacatcggttgattgataaagatacaccactaaccgaaatt
ggtaaaaacaccactcatcaaacattagagttaagagccaaggcagcgagagaacgaata
gaattagaagatttagcccgtgtatttttagcgattaacaaaaagagaggttacagaagc
agtagaaaagtaaataatgaagaagaaggacaagtggttgatggtatggcagtagccaaa
aagttgtatgacgaaaatttaacaccagggcagtacgcctatgaattgctatcaaaaggt
aaaaaatatgtgcctgatttctaccgttcggatttgcaagcggaatttgacagcatttgg
gaatatcaaaagcagttttatgcagatatattagatgacgaattatataatgccttaaaa
ggacaaggacaacaaaatagccgaaaaagatttcttgccattaaaggggtttatactgcc
gaaaataaagggaaaagagatgaagtaaagctacaacattacaaatggcgttccgaggct
attactcaaaaactaagtatagaagaagtagcgtatgtattagtagaaattaataatgac
ctcaataaatccagtgggtatttaggggcgatttcagatagaagcaaggaattgtatttt
aataaagaaaccgtaggtgaaaacctttggaaacaaatacagaaaaatccgcatacttca
ctaaagaaccaagttttctatcgtcaagattatttagatgaatttgagcaaatttgggaa
acacaagctcaatttcacccacaattaacacttgccttaaaggagcaaattcgtgatgtg
gtcattttttatcaacgaaaattaaaatctcaaaaaggcttattgagtttctgccagttt
gaaagttgggaaatagaacgaaaagatgaaaatggcaatgttattctcaataaaactacc
caactaccgaaaaggcagacggtaggtaggcgtgtcgctcctaaatcatcacccttgttt
caagagtttaaaatatggcagaatatcaataatttagagatagcaaaaattagcgatggg
aattcaaaaaacaaaaaagaaacagaggctttaagtgatgatgaacgaaaattattgttt
gaagaattaaaccttagaggaaatctctcacaaaaagaggtgttacaaattttaggttta
aaagataaagaatacaaaacgaattttccagaaggtttggaaggcaaccgaaccaatgcc
gctttattcaatatctatcagcaaattgcagagaatgagggctatggtgattggactaaa
aaatcagctcaagagattaaggaggaattaaaagcagtatttccacaaataggtattcag
gctgatattttagactttaatgcagagttagacggaaaagaatttgaaaatcaagcctct
tatcaattgtggcatttgttgtattctgccgaggaagatgataaaatcaacgaagaagac
caaatcatttacgggaactctgcagtcagtttaaaaaagaaactttgtgaaaaatttggc
tttactcccgaatatgccaaatggatagcgaatgtatccttacaagacgattacggaaat
ttatcaaccaaagcgatgcgtaaaatcattccgtatcttatagacggaaacgattattca
gaagcctgtgcattagcagggtataatcattctaatagtttgactaaagaagaaaatgat
aatagagaacgattgaataaattagaacttttacctaaaaacagtttacgcaatcctgtg
gtggaaaaaatacttaaccaaatggttaatgtggttaatcaagtgattgaaacctatggc
aaacccgatgaagtgcgtattgaattagccagagaactgaaaaaaagtgcagaggaacga
gctgaaatgaccaaaggcatcaacgaagccacacgaagaaatgaagatattaaaaaactc
attacgaaaaatttcggcattcccaatcctactaaaaacgatgtggttcgttatcgttta
tgggaagagttagcacctttagcctataaagatgtttttactggtagacaaattaaaaag
gaagatttattttcatcaaaaatagatatagaacacattattccgaaggcattattattt
gatgattctttctctaataaaactttagcttttagggaaaccaatcttaaaaaagcagac
cgaacggcttatggttttatagaaagtgattataatgcaacacttgacgattatatccaa
cgggtagaaacgctttataataacgccaaaggaactatttccaaaggtaaaagaaataaa
ctcttgatggctcaaaaaaatctgcccgatggatttattgaaagagatttgcgtaatagc
caatatattgctaaaaaagcaaaatcaatgatagagaaagtctttaatgatgtaaatgtg
acctctggaagtattaccgatagactgcgtgaagattgggatttaatcaatgtgatgaaa
gaattgaattttcctaaatacaaagctttaggactgacagagatagaggagcgttatgat
attgggcaagaaaaaacaaaaaaagtagaagtaattaccgattggacaaaacgaaacgac
catagacaccacgcaatggatgcactaacggtggcttttaccacaaaaagtcatgtgcag
tatcttaataatctaaacacgatacattcattaaagggcgatgaggtagatttggaattg
agtaagttatacggacttaaaaataccattacggaagtggtgaataaaaaacgaaaattt
attccaccaatgcctaactttagagaggaagccaaaaagcatatagaaaccattttggtt
tcgattaaaaataaaaataaggtttacaccaaaaacatcaataaaaccaagaaagagtca
ggttatcataccaaagaacaactaacgccacgaggacaattgcataaagaaacggtttat
ggaaaatctaaaagaccgatgaataagcctactaaaatcaataaaaattttagtttagaa
caggctcaacttattatcaatgtacaggaaaaagaattggtgcttcgtcatttagctcaa
tttgacaataatccagcagttgcttttgatacaaaaacactcaaaaaatgccattactta
aaaatggtgaacctttga

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