KEGG   Riemerella anatipestifer ATCC 11845 = DSM 15868: RA0C_1499
Entry
RA0C_1499         CDS       T02107                                 
Name
(GenBank) ATP-dependent metalloprotease ftsh
  KO
K08956  AFG3 family protein [EC:3.4.24.-]
Organism
rai  Riemerella anatipestifer ATCC 11845 = DSM 15868
Brite
KEGG Orthology (KO) [BR:rai00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rai01002]
    RA0C_1499
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:rai03110]
    RA0C_1499
Peptidases and inhibitors [BR:rai01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   RA0C_1499
Chaperones and folding catalysts [BR:rai03110]
 Other chaperones and cochaperones
  AAA proteases
   RA0C_1499
SSDB
Motif
Pfam: Peptidase_M41 AAA AAA_lid_3 nSTAND3 AAA_5 FtsH_ext TIP49 RuvB_N AAA_16 AAA_22 PhoH AAA_33 AAA_14 IstB_IS21 Mg_chelatase AAA_28 AAA_2 AAA_17 Zeta_toxin DUF815 PFam54_60 AAA_PrkA AAA_7 AAA_24 Sigma54_activat ABC_tran AAA_18 KH_PARP14_6
Other DBs
NCBI-ProteinID: AFD56393
UniProt: E4TAM9
LinkDB
Position
1508313..1510289
AA seq 658 aa
MDKNKGFNWFYLLIFGALAVLFLPKLFSSSNTKTINEDEFFNMMRGGKVENLVLMRDSKE
GLVFLNKTAKTASKGTSQADNPLMALQPSPDFKFAFGDLQYFQQRYDAVKKEKPQIKTSM
DFDDSESPMQSLLFQALFWIGIMFLFYFVIFRKMAGGSGAGGQIFNIGKSRAKLFDEKDK
VQVTFKDVAGLEGAKEEVQEVVDFLKNAEKYTKLGGKIPKGVLLVGPPGTGKTLLAKAVA
GEAKVPFFSLSGSDFVEMFVGVGASRVRDLFAQAKAKSPAIIFIDEIDAIGRARGRGAFT
GGNDERENTLNQLLTEMDGFGTDTNVIVMAATNRADILDKALMRAGRFDRSIYVDLPELH
ERKQIFNVHLAKIKLDNTVEVEFLAKQTPGFSGADIANVCNEAALVAARKGHEAVGKQDF
LDAVDRIIGGLEKKNKAIKPSEKRRVAFHEAGHASISWLVEHAAPLLKVTIVPRGRSLGA
AWYLPEERQLTTTEQMLDEMCATLGGRAAEQVVFGTISTGALSDLERVTKQAQAMVTIYG
LNDKVGNISYYDSSGQQEYSFGKPYSEQTAKMIDEEISKIIEGQYQRAINILNENRDKLD
ALADKLLEKEVIFREDLEAIFGKRAWDPELTETPVSSIEEVKKYDEPVVIDNDEENKG
NT seq 1977 nt   +upstreamnt  +downstreamnt
atggataaaaataaagggtttaactggttctacttacttatttttggtgctttggcagtt
ttatttttgccaaagttgttttcttcatctaatacgaaaaccatcaatgaagatgagttt
tttaatatgatgagaggaggcaaagtagagaaccttgtcttaatgagagactctaaagaa
ggcttagtttttctaaacaaaactgcgaaaacagcctcaaaaggtacttcacaagcggat
aatccacttatggcactacaaccgtcgccagattttaaatttgcttttggagatttacaa
tattttcagcagagatatgatgctgtaaagaaggaaaaaccacagataaaaacatctatg
gattttgatgactctgaatcgccaatgcagagcttattattccaagcgttgttttggata
gggattatgtttttgttctactttgttatctttagaaagatggctggaggcagtggtgct
ggtggtcagattttcaacataggaaaatcgagagctaagctttttgatgaaaaagataaa
gtgcaggtaacatttaaagacgttgcaggattagaaggagctaaagaggaagtacaagaa
gtagtggatttccttaaaaatgcagagaaatatactaaactgggcggaaagatacctaaa
ggagttcttcttgtaggacctccaggaacaggtaaaactttattggctaaagcagttgct
ggtgaagctaaagtacctttcttttcgttgtctggttcagactttgtagagatgtttgtg
ggagttggggcttctagagtgagagatttgtttgctcaagctaaagcaaaatcaccagcc
atcatatttatagacgagatagatgctattggtagagctagaggtagaggtgcttttacg
ggaggaaatgatgaaagagaaaatacactaaaccaacttttaacagaaatggacggtttc
ggtacagatactaatgtgatagtaatggcagcaaccaaccgtgcggatattttggataaa
gccttgatgcgtgcaggaaggtttgaccgttccatttatgtagatttacctgaattacac
gagagaaaacaaatatttaatgttcatttagctaaaataaaactagacaatactgtagag
gtagagtttttggcaaagcaaacgcctggttttagtggtgcagatattgcgaatgtatgt
aatgaggcggcattagtggcggcaagaaaaggacacgaagcggtagggaaacaagatttc
ttagatgcagtggacagaattataggtggattagagaagaaaaataaagcaattaagcct
tccgagaagagaagggtagcgttccacgaagctggtcatgcgagtattagttggttagta
gaacacgcagcaccgttgcttaaggtaactattgttcctagagggcgttctttaggtgca
gcttggtatcttccagaggaaagacagcttactactacagagcagatgctagacgaaatg
tgcgcaactctaggtggtagagcagcggagcaagtagtatttggaaccatctctacggga
gctttgtctgatttggaaagagttacgaaacaggctcaagcgatggttaccatttatggt
ttaaatgataaggtaggtaatatttcttattatgatagttcaggacagcaggaatatagc
tttgggaaaccttattctgaacagacggctaaaatgatagatgaggaaatttctaaaatc
atcgaaggtcaataccaaagagctatcaatattttaaatgaaaatagagataaactagat
gcattggcggataagctccttgagaaagaagttatcttccgtgaagatttagaagcgata
tttggcaagagagcgtgggatccagaacttactgaaactccagtttcctctatagaggag
gttaagaaatatgatgaaccagtagtaattgacaatgatgaagaaaacaagggctaa

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