Riemerella anatipestifer ATCC 11845 = DSM 15868: RA0C_1636
Help
Entry
RA0C_1636 CDS
T02107
Name
(GenBank) tonb-dependent receptor plug
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
rai
Riemerella anatipestifer ATCC 11845 = DSM 15868
Brite
KEGG Orthology (KO) [BR:
rai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rai02000
]
RA0C_1636
Transporters [BR:
rai02000
]
Other transporters
Pores ion channels [TC:
1
]
RA0C_1636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AFD56523
UniProt:
E4TCK6
LinkDB
All DBs
Position
1652125..1654152
Genome browser
AA seq
675 aa
AA seq
DB search
MRRTLFLLGSCFSISVFSQEVDSAKSSKNIEEIVMTGTLKAVSRDKSPVPVEVFSAKFFE
KNPTPSIMESVEMINGVRPQLNCSVCNTGDIHINGLEGPYTLILIDGMPIVSSLSTVYGL
NGIPNSMIERVEVVKGPASSLYGSEAMGGIINIITKNALTAPRLTLNLNSTSWGEHNTDI
GGKFRLNDKVSSLLSLNYFNFQNKIDKNKDNFTDAALQNRISVFNKWDFQRNEGRVASLA
LRYLNEDRFGGVLEWEKKHRGSDDVYGESVYTKRFEAIGTYQLPIKEKVVTQFSYNYHHQ
DSFYGDVPYLAKQSTAFGQIYWDKTLGKSDFLLGATVKNVYYDDNTPGTLSKDGKINQPQ
NDWLPGIFAQNQWNINDKNTLLVGYRLDWSKIHGAIHSPRVAYKWSLAPQTNLRASFGTG
FRVVNLFTEDHAALTGSREVVISEALNPERSYNGNFNLTHKIYTSGGYVNFDVVGFYSHF
TNKIIGDFDTNPNQIIYQNLKGYAVSKGVSLNTELKLGSPLTVNLGASYMEVYQKYEEDG
QTETLQQLFAPRWSGTYTISYNFPKEWSADFTGAFYGPMRLPVLPDDFRPAHSPWYTLAN
IQIRKHFSKLGIEVYGGVKNLFNFTPKNPIMRPFDPFDTKVSEPSNPYGYTFDTEYGYAP
MLGIRGFVGLRYNIK
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgagacgaacattatttttattaggtagttgctttagtataagcgttttttctcaagag
gtagactctgctaaatcttctaaaaatatagaagaaatcgtaatgacgggtacgctaaag
gcggtaagtagagataaaagccctgtgccggtagaggtattttctgcaaaattttttgaa
aagaatcccactcccagtattatggaatcggtggaaatgattaacggtgtgcgtccgcaa
cttaattgttccgtttgcaatacgggagatattcatatcaatgggttagaaggaccatac
actttgattttaattgatggaatgccgattgtaagctctctttccacagtttacgggctt
aatggtatcccaaatagtatgatagaacgggtggaagtggttaaaggtcccgcttcgtcc
ctttacggttcggaagcaatgggaggtatcatcaatatcattactaaaaacgcacttact
gcaccgcgtttaacgcttaatcttaactccacttcttggggcgaacacaatacagacatt
ggcggtaaatttagattaaacgataaggtgtcctctttattaagccttaattatttcaat
tttcaaaataaaatagataagaataaggacaactttaccgatgcggcattacaaaaccga
atttcagtattcaataaatgggatttccaaagaaatgaaggaagagtggcgagtttggct
ttaaggtatcttaacgaagaccgttttggaggcgttttagaatgggagaaaaaacaccga
gggagtgatgatgtttatggtgaaagtgtttataccaaaagatttgaagcgataggaact
tatcaacttccaataaaagaaaaagtggttactcaattttcgtataactatcatcatcaa
gattcgttttatggcgatgtgccttatttggcgaagcaatctacggcgtttggacaaatc
tattgggataagactttgggtaaatctgattttttattgggagctaccgtcaaaaatgta
tattacgacgataatacgccagggacactttctaaagacggaaaaattaatcagcctcaa
aatgattggctgccagggatttttgctcaaaaccaatggaatatcaacgataaaaatact
ttattggtaggctaccgattagattggtctaaaattcacggagcgatacattcaccaaga
gtggcgtataaatggagtttggctcctcaaaccaatttgagggcgagttttgggacgggg
ttccgagtagttaatctttttacggaagaccacgctgcccttacagggtctcgggaagtg
gtgatttcggaagccttgaatcctgaacgctcctacaacggaaattttaatcttacgcac
aaaatttatacctctggcggttacgttaattttgatgtggtcgggttttactctcatttc
actaataaaatcattggggattttgataccaatcccaaccaaattatttatcaaaatttg
aaaggctatgcggtgagtaaaggcgtttcactgaatacagaattaaaattagggtcgcca
cttacagttaatttgggagcgtcttatatggaggtgtatcagaaatacgaagaagatggg
caaacggaaaccctacagcagctatttgctcccagatggtcgggaacttatactatcagc
tataattttccaaaggaatggagcgccgattttacgggggctttttatggaccgatgcgt
ttgcctgtgttgcctgatgatttcagaccagcccattcgccttggtacactttagcgaat
attcagattagaaaacatttttctaaactcggcatagaggtgtatggtggtgtgaaaaac
ttgtttaattttacacctaaaaatcctattatgcgaccgtttgacccgtttgatacaaaa
gtttcggagccgagtaacccgtatggttatacctttgataccgaatatggctatgctcca
atgttgggcatcagagggtttgtaggattgagatataacattaaataa
DBGET
integrated database retrieval system
