Riemerella anatipestifer ATCC 11845 = DSM 15868: RA0C_1871
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Entry
RA0C_1871 CDS
T02107
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rai
Riemerella anatipestifer ATCC 11845 = DSM 15868
Pathway
rai00470
D-Amino acid metabolism
rai00550
Peptidoglycan biosynthesis
rai01100
Metabolic pathways
rai01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rai00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RA0C_1871
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RA0C_1871
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RA0C_1871
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rai01011
]
RA0C_1871
Enzymes [BR:
rai01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RA0C_1871
Peptidoglycan biosynthesis and degradation proteins [BR:
rai01011
]
Precursor biosynthesis
Amino acid ligase
RA0C_1871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
CPSase_L_D2
ATP-grasp
GARS_A
RimK
Motif
Other DBs
NCBI-ProteinID:
AFD56746
UniProt:
E4TD77
LinkDB
All DBs
Position
1897190..1898173
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AA seq
327 aa
AA seq
DB search
MSKKNIAVVMGGYSDEYKVSLKSGQLIYDSLDRDLYNVYKVVVLKEGWFYLDENEAKLPI
QKGDFSVNLPSGEVLRFDVCFNTIHGTPGENGVLQAYWDAIGQKYTGCDFYQSALTFNKK
DTLAVLAKYGIPSAKSFYIKKGEAYDKDKIINELKLPLFVKPNQSGSSLGISKVKEVSEF
EAALEKAFLEDDEVLVESFLDGMEVSVGVLDYKGETIVLGITEIIPETEFFDYEAKYQGA
SQEITPARLDEATRLRVEEVAKRAYNSLGMKGFSRSEYIIMNGVPYMLEMNTNPGFSPAS
ILPQQARIYGISIKDLCGNEVEKALAK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaaaaatatagccgtagttatgggcggatactccgatgagtacaaagtttcc
ctaaaaagtggacaactaatttacgactctttagaccgtgatttatataatgtctataaa
gtggtagttcttaaggaaggttggttttatttagacgaaaatgaggctaaactaccaata
caaaaaggagatttttctgtaaatctacctagtggagaagtactgcgttttgatgtttgt
tttaataccattcacgggacaccaggtgaaaatggtgtgttacaggcatattgggacgct
attggtcaaaaatatacagggtgtgatttttaccaaagtgcacttacctttaataaaaaa
gatactttggctgtattagcaaagtatggtattccgtctgctaaaagtttctacataaaa
aaaggagaggcttatgataaagataaaattatcaacgagttaaaactgcctctatttgta
aagcctaatcaaagtggttcttctttaggaatttctaaggtaaaagaggtttcggagttt
gaagcagctttagaaaaagcatttttggaagacgatgaggttttagtagaaagtttctta
gacggtatggaggtatctgtgggtgtgctagattataaaggtgagactattgttttaggc
attacagaaattatcccagaaacagaattttttgattacgaagcaaagtatcaaggagcg
tctcaagagattacaccagcaaggctagatgaggctactagattaagagtagaggaagtt
gcaaaaagagcttataactctttaggaatgaaagggttttctagaagtgaatatattatt
atgaacggtgtgccttatatgctagaaatgaatactaaccctgggttttcacctgcgagt
atccttcctcaacaagcgagaatttacggtatctccattaaagatttgtgcggaaacgag
gtagaaaaagcgctagcaaaataa
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