Riemerella anatipestifer ATCC 11845 = DSM 15868: RA0C_2006
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Entry
RA0C_2006 CDS
T02107
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rai
Riemerella anatipestifer ATCC 11845 = DSM 15868
Pathway
rai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RA0C_2006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rai03400
]
RA0C_2006
Enzymes [BR:
rai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RA0C_2006
DNA repair and recombination proteins [BR:
rai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RA0C_2006
Prokaryotic type
RA0C_2006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFD56877
UniProt:
E4TDK6
LinkDB
All DBs
Position
complement(2041708..2042349)
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AA seq
213 aa
AA seq
DB search
MTWTEVLAPIKNSSYFKNLWQKVKQEYHQYKCFPPKEQIFRAIELTPFEEVKVVILGQDP
YHNDFQANGLCFSVSDQVPAPPSLRNIFKELQDDLGIIKTSNKLDSWAKQGVLLLNATLT
VKAHEANSHKDLGWETFTDFIIKEISDKKENIVFVLWGSFAQKKAQFIDAHKHYIIKTAH
PSPLSAHRGFLGSKPFSKINNYLLSKNKEEIKW
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgacttggactgaagtattagcacctataaaaaattcctcttactttaaaaatttatgg
caaaaagtaaaacaggagtatcaccagtataaatgctttcctcccaaagaacaaatattt
agagctattgagcttactccttttgaagaagtgaaagtcgtaattttagggcaagaccct
tatcataatgattttcaagctaacggattatgtttttctgtatcagaccaagtacctgca
ccaccatcactaagaaatattttcaaagagttgcaagacgatttaggtataattaaaacc
agcaacaagctagactcttgggcaaagcaaggcgtacttctactaaatgctactcttacc
gtaaaagctcacgaagcaaactctcataaagatttaggttgggaaacatttacagatttc
atcattaaagaaatatcagataaaaaagaaaatattgtttttgtgctttggggttctttt
gcacaaaaaaaagctcagtttatagacgcacataagcattacattataaaaacggctcac
ccttctcccctatcagctcacagaggctttctaggtagcaaacctttctccaagataaac
aattatcttctatcaaaaaataaggaggaaattaaatggtaa
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