Raineyella fluvialis: Rai3103_00100
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Entry
Rai3103_00100 CDS
T06259
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rain
Raineyella fluvialis
Brite
KEGG Orthology (KO) [BR:
rain00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rain03032
]
Rai3103_00100
03400 DNA repair and recombination proteins [BR:
rain03400
]
Rai3103_00100
Enzymes [BR:
rain01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Rai3103_00100
DNA replication proteins [BR:
rain03032
]
Prokaryotic type
DNA Topoisomerases
Rai3103_00100
DNA repair and recombination proteins [BR:
rain03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Rai3103_00100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QGF22347
UniProt:
A0A5Q2F9C6
LinkDB
All DBs
Position
31165..32169
Genome browser
AA seq
334 aa
AA seq
DB search
MVRLRMVSPRSPGWSRRRAGKGFTYVDEHGDRLSPEQVERIRSLAIPPAWRDVWICPRPN
GHLQAVGTDDAGRRQYLYHPVWREKKDREKFDRVLAAAETLPEARARVAEDIRRSGMPLL
RADAVAFRLLDLGYFRIGNDAYADAHGSFGLTTLQRRHVHRHGDEMVFRFVGKSGIEHTV
VIDDEDAIRALETMRRRRSPGDRLMAYRETTGWRDLDSAAVNSYLRDLFDGELTAKDFRT
WHATVLAAAALARSDEPGSTAASRNRAIRAAVLEAAGYLGNTPTVARHSYIDPRVIDRYE
SGTTIGEVAWADDPDPAIRQSALESATIALLRDS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgattgcggatggtgtccccgcgttcgcccggctggagccggcggcgagccggc
aagggattcacgtacgtcgacgagcacggcgaccgcctctcccccgagcaggtcgagcgg
atcaggtcattggcgatcccacccgcctggcgggacgtgtggatctgtccgcgcccgaac
ggtcatctgcaggccgtcggcaccgacgacgcgggccgacgccagtacctctaccacccg
gtgtggcgggagaagaaggaccgagagaagttcgatcgggtcctggccgccgccgaaacc
ctccccgaggctcgcgcccgcgtggcggaggacatccggcgcagcggcatgccgctgctc
cgggcggacgcggtcgccttccggctcctcgacctcggctacttccggatcggcaacgac
gcgtacgcggacgcgcacggcagcttcgggctgaccaccctgcagcgccgccacgtccac
cgccacggcgacgagatggtcttccgcttcgtcggcaagtcgggcatcgagcacacggtg
gtcatcgatgacgaggacgcgatccgtgccctcgagacgatgcggcggcgacgcagtccc
ggcgatcggctgatggcctaccgggagacgaccgggtggcgggacctggactccgccgcg
gtcaacagctacctccgcgacctcttcgacggggagctgacggccaaggacttccggacc
tggcacgccaccgtcctcgccgccgcagcgctcgcccgctccgatgaaccaggttccacc
gcggcgtcccggaaccgggcgatccgtgcggcagtgctcgaggcggcgggatacctcggg
aacacacccaccgtggcacgccactcctacatcgaccctcgggtgatcgaccgctacgag
agcggcaccaccatcggcgaggtggcctgggcggacgatccggatccggccatccgccag
tccgctctggagtcggcaaccatcgccctgctgcgcgacagctga
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integrated database retrieval system
