Raineyella fluvialis: Rai3103_02350
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Entry
Rai3103_02350 CDS
T06259
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rain
Raineyella fluvialis
Pathway
rain03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rain00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Rai3103_02350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rain03021
]
Rai3103_02350
03400 DNA repair and recombination proteins [BR:
rain03400
]
Rai3103_02350
Enzymes [BR:
rain01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Rai3103_02350
Transcription machinery [BR:
rain03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Rai3103_02350
DNA repair and recombination proteins [BR:
rain03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Rai3103_02350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Rrn6_HB
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QGF22713
UniProt:
A0A5Q2FCA5
LinkDB
All DBs
Position
complement(532092..533114)
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPTLSEEVLDEHRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAALTSIKIDGNL
HEFSTLPGVVEDVTEIILNLKGLVLTSEEDEPVVMYLRKAGAGEVTAADIQPPAGVEVHN
PDLHIATLNRDGAIDMEFVVERGRGYVSSDQNKETEHEIGRIPVDSIYSPVLKVSYKVEA
TRVEQRTDFDRLVVDVETKPSITPRDAVASAGRTLVELFGLFRELNVEAEGVEIGPSPVD
DQYATDLALPVEDLNLSVRSYNCLRREGIHTVGELISRSEQDLLDIRNFGSKSIDEVKQQ
LATMGLSLKDSAPGFDPYTYAGAGGEDEDEDTDFAETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgcccagcgcccgaccctgagcgaagaggtcctcgacgagcaccgttcgcgg
ttcgtcatcgagcccctcgagcccggcttcggttacaccctcggcaactcgctgcgtcgt
acgctcctgtcctcgatccccggtgctgccctgaccagcatcaagatcgacgggaacctg
cacgagttctcgaccctccccggggtcgtcgaggacgtcaccgagatcatcctcaacctc
aagggcctcgtgctcacctcggaggaggacgagccggtggtcatgtacctgcgcaaggcc
ggtgccggtgaggtcaccgccgccgatatccagccgccggctggtgtcgaggtgcacaac
cccgacctgcacatcgccacgctcaaccgcgacggcgccatcgacatggagttcgtcgtc
gagcgcggccgtggctacgtgtcgtccgaccagaacaaggagacggagcacgagatcggc
cgcatcccggtcgactcgatctactccccggtcctgaaggtcagctacaaggtggaggcc
acccgcgtcgagcagcggacggacttcgaccgcctcgtcgtcgacgtggagaccaagccg
tcgatcaccccgcgtgacgcggtcgcctccgccggtcggacgctcgtcgagctcttcggc
ctgttccgggagctcaacgtcgaggccgagggcgtcgagatcggcccgtcgccggtcgac
gaccagtacgccaccgacctggccctgccggtcgaggacctcaacctgtccgtgcgttcc
tacaactgcctgcgtcgtgagggcatccacaccgtgggtgagctcatctcgcgttccgag
caggacctgctcgacatccgcaacttcggctccaagtccatcgacgaggtcaagcagcag
ctggccacgatgggcctgtcgctcaaggacagcgctcccggcttcgacccctacacctac
gccggtgcgggtggcgaggacgaggacgaggacaccgacttcgcggagaccgagcagtac
tga
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