Raineyella fluvialis: Rai3103_04355
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Entry
Rai3103_04355 CDS
T06259
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rain
Raineyella fluvialis
Pathway
rain03420
Nucleotide excision repair
rain03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rain00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Rai3103_04355
03430 Mismatch repair
Rai3103_04355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rain03400
]
Rai3103_04355
Enzymes [BR:
rain01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Rai3103_04355
DNA repair and recombination proteins [BR:
rain03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Rai3103_04355
MMR (mismatch excision repair)
Other MMR factors
Rai3103_04355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
UvrD-helicase
Viral_helicase1
UvrD_C_2
AAA_30
AAA_16
AAA_22
UvrD_C
SLFN-g3_helicase
PhoH
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QGF23022
UniProt:
A0A5Q2F7Z5
LinkDB
All DBs
Position
945478..947316
Genome browser
AA seq
612 aa
AA seq
DB search
MVATTAAVDVCTGGEVAEQDPSVLEYERDMNTAYLANLERRSGGYEIDDRTRWTPRITIG
SLIGRVRMRYDGDDADEEFYVAETSADLDGVEVISWAAPAAAAYYGKRYGEESGLKIRRR
FTKGPQHGIETYADEWIIAPDGAEFSTPSAGLTAREEPQAAQAELPRVVPGTEEQLRKPR
TSLKALLRTLQPEQYDLVAASPTESLTIQGYAGTGKTVVATHRAAWLTHTDRETPLRRVA
LIGPTQTWARHISPVVDELATPGTVTITSLPEVMRTIIGAPERHASSDDFLDAYSAQLGK
TLDRLVTKQRKADPALTPARAYEVFLHTNDLSIPASRRPEFLLWRETLPQTYENALGDRT
LWPLLTYLTVLLSPQARYDHIIVDEAQDLRPLEWLILTHLNSGAWTLVGDTHQRRTSHTP
RGWKEIRTLLGLSTWDEESLLGGYRTTKAIIDFAACLLEGSAGHRAYDVLGEGEPPLIIH
ARTVDELEAITLEQADRLSADHPKGKVAVITPLVRPVGSYAHRHGWTEGADHYWSNEDGR
RFTLLTSEEARGLEFDAVVVVEPSAFKALPGDNGPLYTALTRANLELVIVHERVLPPKMV
RHLRTHRPAVLA
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgccacgacggcggccgtcgacgtctgcacagggggagaagtggccgaacaggat
ccgtccgtcctggagtacgagcgggacatgaacaccgcgtacctggccaacctggaacgc
cgctccggcggttacgagatcgacgaccgcacccgctggactcccaggatcaccatcggc
tcactgatcgggcgggtccggatgcgctatgacggcgacgacgcggacgaggagttctac
gtcgccgagacatcggccgatctcgacggcgtcgaggtgatcagttgggccgccccggcc
gccgcggcgtactacggcaagcggtacggcgaggagtccgggctgaagatccgccggcgc
ttcaccaagggcccgcagcacggcatcgagacgtacgccgacgagtggatcatcgccccg
gacggggcggagttcagcacgccctccgcgggcctgacggcgcgggaggagccccaggcg
gcccaggccgagctgccccgggtcgtccccggcacggaggagcagttgcgcaagccgcgg
acatcactcaaggcgctgctgcggaccctccagcccgagcagtacgacctggtcgccgcc
tcccccaccgagtcgctgacgatccagggctacgcgggaacgggcaagacggtggtcgcg
acgcatcgcgccgcctggctcacccacaccgaccgcgagacgccgctacgcagggtggcg
ctgatcgggccgacgcagacctgggcgcgccacatcagccccgtggtcgacgaactcgcc
acccccggcacggtgacgatcacctcgctgccggaggtgatgcggaccatcatcggcgcc
cccgaacggcacgcctccagcgacgacttcctcgacgcctactccgcacagctgggaaag
acgctggacaggctcgtcaccaagcagcgcaaggcggaccccgcgctgactcccgcccgg
gcgtacgaggtcttcctgcacaccaacgacctgtcgatccctgcctcccgcagacccgag
ttcctcctctggcgggagacgctgccccagacgtacgagaacgccctgggcgaccggacg
ctgtggccgctactcacctacctcaccgtgctgttgagcccgcaggcgcgctacgaccac
atcatcgtcgacgaggcgcaggacctgcggccgctggagtggctgatcctcacccacctg
aacagcggcgcctggacgctggtcggcgacacccaccagcgccggaccagccacacaccc
cgtggctggaaggagatccgcacgctgctggggctgtcgacctgggacgaggagtcgctg
ctcggtggctaccggaccaccaaggcgatcatcgacttcgcggcgtgtctcctcgagggg
tccgccggccatcgggcgtacgacgtgctgggcgagggcgagccgccgctgatcatccat
gcccgcaccgtcgacgagctcgaggcgatcaccctcgagcaggccgaccggctctccgcg
gatcatccgaagggcaaggtcgcggtgatcaccccgctggtgcgccccgtcggctcgtac
gcgcaccggcatggctggaccgaaggtgctgaccactactggtccaacgaggacggccgc
cggttcaccctgctgacctcggaggaggcgcggggtctggagttcgacgcggtcgtggtg
gtcgagccctcggccttcaaggcgctgcccggcgacaacggccccctctacacggcgctg
acccgggccaatctggaactggtcatcgtgcacgagcgcgtgctgccgccgaagatggtc
cgccacctgcggacgcaccggcctgctgtcctcgcctga
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