Raineyella fluvialis: Rai3103_10315
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Entry
Rai3103_10315 CDS
T06259
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
rain
Raineyella fluvialis
Pathway
rain03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rain00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Rai3103_10315
09124 Replication and repair
03420 Nucleotide excision repair
Rai3103_10315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rain03021
]
Rai3103_10315
03400 DNA repair and recombination proteins [BR:
rain03400
]
Rai3103_10315
Enzymes [BR:
rain01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Rai3103_10315
Transcription machinery [BR:
rain03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Rai3103_10315
DNA repair and recombination proteins [BR:
rain03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Rai3103_10315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
DUF7108
Motif
Other DBs
NCBI-ProteinID:
QGF24008
UniProt:
A0A5Q2FBA6
LinkDB
All DBs
Position
complement(2275588..2277249)
Genome browser
AA seq
553 aa
AA seq
DB search
MVPMSSPGPLVVQSDRTLLLEVDHPLADECRLAIAPFAELERAPEHIHTYRLTPLGLWNA
RAAGHDAEQVVDVLLTYSRYPVPSTLLVDVAETMDRYGRLRIEKHPVHGLILVSTDAAVL
TEVVRAKQVAGMLGAVIDADTVAVHPSERGHLKQVLLKLGWPAEDLAGYVDGERHPIALA
EDGWQLRTYQNQAVDSFWQGGSGVVVLPCGAGKTLVGAAAMARAAATTLILVTNTVSARQ
WRDELLRRTTLTPDEIGEYSGARKEIRPVTIATYQVITTKRNGIHPHLELFSARDWGLVI
YDEVHLLPAPVFRMTADLQARRRLGLTATLVREDGHEGDVFSLIGPKRFDAPWKDLENQG
WIAPAQCIEVRVTLRDDERLAYAMAEPDVKYRLAATAETKQRAILDLVEHHRGTPTLVIG
QYVDQLDELAETLDAPLIKGSTPNSRREELFDAFRRGEITLLVVSKVANFSIDLPTAEVA
IQVSGAFGSRQEEAQRLGRLLRPSGDKTARFYAVVSRDTSDADFAQHRQRFLAEQGYSYR
IMDADDLEELDRG
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggtccccatgtcatctcccgggccgttggtcgtgcagtcggaccgtacgctcctgctc
gaggtcgaccacccgctggccgacgaatgccgactggccatcgccccgttcgccgagctg
gagcgggcccccgagcacatccacacctaccggctcaccccgctgggactgtggaacgcg
cgtgccgccggccacgacgccgagcaggtcgtcgacgtcctcctcacctactcgcgctat
cccgtgccgagcactctgctggtcgacgtggctgagacgatggaccgctacgggcggctg
cggatcgagaagcacccggtgcacggactgatcctcgtctccaccgatgcggcggtgctc
accgaggtggtccgtgccaagcaggtggcgggcatgctgggggcggtgatcgacgccgac
accgtcgcggtccatccctccgaacgaggccatctcaagcaggtgctgctcaagctcggc
tggccggccgaggacctcgccggctacgtcgacggcgaacgtcacccgatcgcgctggcc
gaggacggctggcagctgcggacctaccagaaccaggcggtggattccttctggcaggga
ggttcgggggtcgtcgtcctgccctgcggagccggtaagacgctggtcggggccgcggcg
atggcccgggcggccgcgacgaccctcatcctggtcaccaacaccgtctcggcccggcag
tggcgcgacgagttgctgcgccgcacgaccctcacgcccgacgagatcggcgagtactcc
ggtgcccgcaaggagatccggccggtgaccatcgcgacgtaccaggtcatcaccaccaaa
cgcaacggtatccacccgcacctggaactgttcagtgcccgcgactggggcctggtcatc
tatgacgaggtgcacctgctgccggccccggtgttccggatgaccgcggacctgcaggcg
cgccgccgcctcgggctcaccgcgacgctggtccgcgaggacggccacgagggggacgtg
ttctccctgatcgggccgaagcgcttcgacgccccgtggaaggacctggagaaccagggg
tggatcgcccccgcgcagtgcatcgaggtgcgggtcaccctcagggacgacgagcggttg
gcgtacgccatggcggagccggacgtgaagtaccggctggccgccacggcggagaccaag
cagcgggccatcctcgatctggtcgagcaccaccggggcaccccgacactggtgatcggg
cagtacgtcgaccagctcgacgaactcgccgagacactcgacgccccgctgatcaagggg
tccaccccgaattcccggcgtgaggaactcttcgacgccttccgccgcggggagatcacc
ctgctggtcgtctccaaggtcgccaacttctccatcgacctgccgaccgccgaggtggcg
atccaggtctccggggccttcgggtcgcgtcaggaggaggcgcagcggctcggtcggctg
cttcggccctccggcgacaagacggcccgcttctacgccgtggtgtcgcgcgacacctcc
gacgccgacttcgcccagcaccggcagcggttcctggccgagcagggctacagctaccgg
atcatggacgccgatgatctcgaggagctcgatcgaggctga
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