Raineyella fluvialis: Rai3103_11265
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Entry
Rai3103_11265 CDS
T06259
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rain
Raineyella fluvialis
Pathway
rain00300
Lysine biosynthesis
rain01100
Metabolic pathways
rain01120
Microbial metabolism in diverse environments
rain01230
Biosynthesis of amino acids
Module
rain_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rain00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Rai3103_11265
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rain01002
]
Rai3103_11265
Enzymes [BR:
rain01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Rai3103_11265
Peptidases and inhibitors [BR:
rain01002
]
Metallo peptidases
Family M20
Rai3103_11265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QGF24157
UniProt:
A0A5Q2FEC5
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All DBs
Position
2460467..2461570
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AA seq
367 aa
AA seq
DB search
MALDLRADVVDLLGSIVDIESVSGNERHLADEVESALREYPHLEVVRLGNNVLARTGLGR
AERVVVAGHLDTVPLADNLPSEIRTVDGEERLYGRGTCDMKAGVAVALSLAAELSAPSRD
VTWIFYDNEEVEAARNGLNTVERERPDLMEADFAVLGEPSGARVEGGCQGTMRFTLTTTG
VAAHSARAWRGVNAIHAAADVLERLAAYEPRKVVVDGLEYIEGLNAVRIHGGVAGNVIPD
RCTIEINFRFAPDRTPEEAERYVRDVFEGYPIEVTDLAPGARPGLDLPIAQEFLRAVGSE
PAAKYGWTDVARFSARGVPAVNYGPGDPLKAHQDDEYCAVASVRTVRAALAQWLGGGPAG
ARTSGDE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggccctggatctgcgtgcggacgtcgtcgacctgctcggatcgatcgtcgacatcgaa
tcggtgagcgggaacgagcggcacctcgccgacgaggtcgagagcgccctgcgggagtac
ccgcacctcgaggtcgtccgcctcggcaacaacgttctcgcccgcaccggtctgggccgg
gcggaacgggtcgtggtcgccgggcacctggacacggtgcccttggcggacaacctcccc
tccgagatccgtacggtcgacggcgaggaacggctgtacgggcgaggcacctgtgacatg
aaggccggcgtggcggtcgccctctctctcgccgcggaactctccgcgcccagccgggac
gtgacctggatcttctacgacaacgaggaggtcgaggcggcgcgtaacggcctcaacacc
gtcgagcgtgagcgccccgacctgatggaggccgatttcgccgtgctcggcgagccgtcc
ggagcccgggtcgaaggcggttgccagggcaccatgcggttcaccctcaccacgaccggc
gtggccgcccactccgcgcgcgcctggcgtggcgtcaacgccatccatgccgccgccgac
gtgctggaacggctggcggcgtacgagccccgcaaggtcgtcgtcgacggcctggagtac
atcgagggcctcaacgccgtccgtatccacgggggcgtcgcgggcaacgtgatcccggat
cgctgcacgatcgagatcaacttccgcttcgccccggatcgtacgccggaggaggcggaa
cgctacgtccgcgatgtcttcgagggctacccgatcgaggtgaccgacctcgcgccgggc
gcccgcccgggcctcgacctgccgatcgcgcaggagttcctccgcgccgtcggctccgaa
ccggcggcgaaatacggatggaccgacgtcgcccggttctcggcgcgcggtgtcccggcc
gtgaactacggacccggcgacccgctcaaggcccaccaggacgacgagtactgcgccgtc
gcctccgtccgcacggtgcgggccgcgctggcgcagtggctgggcggcggccccgccggt
gccaggaccagcggcgatgagtga
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