Raineyella fluvialis: Rai3103_11845
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Entry
Rai3103_11845 CDS
T06259
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rain
Raineyella fluvialis
Pathway
rain03030
DNA replication
rain03410
Base excision repair
rain03420
Nucleotide excision repair
rain03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rain00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rai3103_11845 (polA)
03410 Base excision repair
Rai3103_11845 (polA)
03420 Nucleotide excision repair
Rai3103_11845 (polA)
03440 Homologous recombination
Rai3103_11845 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rain03032
]
Rai3103_11845 (polA)
03400 DNA repair and recombination proteins [BR:
rain03400
]
Rai3103_11845 (polA)
Enzymes [BR:
rain01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rai3103_11845 (polA)
DNA replication proteins [BR:
rain03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Rai3103_11845 (polA)
DNA repair and recombination proteins [BR:
rain03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Rai3103_11845 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Rai3103_11845 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH
FabMG
Motif
Other DBs
NCBI-ProteinID:
QGF24244
UniProt:
A0A5Q2FFF4
LinkDB
All DBs
Position
2593359..2596115
Genome browser
AA seq
918 aa
AA seq
DB search
MATTTAPRTTVPGPAQTTSSPDGGRPRLLLIDGHSVAYRAFFALPTQNFSTSTGQVTNAV
FGFTSMLINLLRDWQPTHLGVAFDVSRRSFRTEVYEDYKATRDASPAEFRGQVELIKEVL
DAMRVLHLEKDGYEADDLLATLAAAAEREGMDVRVCTGDRDTFQLVTERVHVLYPRKGVS
DLLDLGPEGVEERYLVRPDRYPELAALVGETSDNLPGVPGVGPKTAAKWLSQYDGLENLL
ARVSEVKGKAGENLRAHLDDVRRNRDLNRLVRDVEIDVAPADLARHPVDREAVHQLFDQL
EFRVLRDRLFELLRAEEPVTDADGAVAIEVVDDAPQPGSLGGWLADHTADGPTGLDITGR
WSAGSGDVVGLSIAGADGHALSVDPAELEPADEHALAAWLADPARLKVLHDGKGPLLAFW
ARGWAPAGLWSDTALAAYLLRPDQRSYDLADLVTRTLHQELVVVEGGQAPAQSALDLGDD
SGSAGHEARIRAEAVRRLALVLEDDLDAHQGSGLLHDVELPLMRVLAGMERTGIALDTDL
LDGLHQDFDARVQRAASEAYDVLGREVNLGSPKQLQAVLFDELGMPKTRRTKSGWTTDAE
ALQTLFEQTDHPFLAHLLEHRDAIRLRQTVEGLQKSVADDGRIHTTFLQTVAATGRLSST
DPNLQNIPIRTEEGRRIREAFVVGAGYECLLTADYSQIEMRIMAHVSGDDALIEAFRSGR
DFHAVTAAHVFGVPADQVTGAQRAKIKAMNYGLAYGLSAFGLSNQLRISVPEARELMADY
FAIFGEVHAYLTGVVDEARRSGYTATLLGRRRYLPDLTSSNRQRREMAERMALNAPIQGS
AADIIKLAMLKVDDRLRESGLTSRMLLQIHDELLFEVAPGERDDVEALVREAMGAAMALD
VPLDVSVGSGRSWHEAAH
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
gtggccaccacgacagcaccccgtacgacagtccccggtcccgcccagacgacgagttct
cccgacggcggccggccgaggctcctgctgatcgacgggcactcggtcgcctaccgggcg
ttcttcgcgctgccgacgcagaacttctcgaccagcaccggccaggtgacgaacgccgtg
ttcggcttcacctcgatgctcatcaacctcctgcgcgactggcagcccacccacctgggg
gtcgccttcgacgtctcgcgccgcagcttccgcaccgaggtgtacgaggactacaaggcc
acccgggatgcctccccggcggagttccgcggccaggtcgagctgatcaaggaggtgctc
gacgcgatgcgcgtcctgcacctcgagaaggacggttacgaggccgacgacctgctggcc
acgctcgccgcggctgctgaacgcgagggcatggacgtccgggtgtgcaccggggaccgc
gacaccttccagttggtgaccgagcgggtccacgtcctctacccgcgcaagggtgtctcc
gacctgctcgacctcggtccggagggtgtcgaggagcgctatctggtccgccccgaccgc
tatcccgagctggccgccctggtgggcgagacctccgacaacctgcccggtgtcccaggt
gtcggccccaagacggcggcaaagtggctcagccagtacgacggtctggagaacctgctg
gcccgcgtgtccgaggtgaagggcaaggccggggagaacctgcgcgcccatctggacgac
gtccgccgcaaccgcgacctcaaccgactcgtacgcgacgtggagatcgacgtcgctccc
gctgacctggcccgccacccggtcgatcgggaggcggtgcaccaactgttcgaccagttg
gagttccgggtcctgcgggaccgcctgttcgagttgctccgtgccgaggaaccggtcacg
gacgccgacggcgcagtggccatcgaggtggtcgacgacgcgccgcagccggggagcctc
ggcggctggctggccgaccacaccgctgacggacccaccggcctggacatcaccggccgt
tggagtgcgggcagcggagacgtggtggggctgtcgatcgcgggcgcggacggccacgcg
ctctctgtcgatcccgccgagctcgagcccgccgacgagcatgccctggctgcctggctg
gcggacccggcgaggctcaaggtcctccacgacggcaagggaccactgttggcgttctgg
gcccgcggctgggcaccggccggtctgtggtcggacacagcgctggccgcctacctgttg
cgccccgaccagcggtcgtacgatctggccgacctggtcacccggacactgcaccaggaa
ctggtcgtcgtcgagggcggtcaggcgccggcgcagtcggcactcgatctgggcgacgac
tccgggtcggccggacacgaggcccggatccgggccgaggccgtccggcggctggccctg
gtactggaggacgatctggacgcccaccaggggagcggactgctgcacgacgttgagctt
cccctgatgcgagtgctcgccgggatggaacggactggcattgccctcgacaccgacctg
ctcgatggactccaccaggacttcgacgcccgggtccagcgggccgcgtccgaggcgtac
gacgtgctgggccgggaggtcaacctgggctcgcccaagcagctgcaggcagtgctcttc
gacgagctggggatgccgaagacccgtcggaccaagagtggctggaccaccgacgccgaa
gccctgcagaccctgttcgagcagaccgaccatccgttcctggcgcacctgctggagcat
cgcgacgccatccggctgcggcagaccgtggaggggctgcagaagtccgtcgccgacgac
ggccggatccacaccaccttcctgcagacggtcgccgcgaccggacgcctgtcgagcacc
gacccgaacctgcagaacatcccgatccgcaccgaggagggccgccggatccgagaggcg
ttcgtcgtcggggccggctacgagtgcctgctgaccgccgactactcccagatcgagatg
cgcatcatggcccacgtgtcgggtgacgacgcgctgatcgaggccttcaggtccggacgc
gacttccacgccgtgaccgccgcgcatgtcttcggcgtgccggccgaccaggtcaccggc
gcccagcgggcgaagatcaaggcgatgaactacggcctggcgtacggcctgtcagccttc
ggcctgtccaaccaactccgtatctcggtgccggaggccagggagctgatggcggactac
ttcgccatcttcggggaggtgcacgcctacctcactggggtcgtcgacgaggcgcgccga
tcgggctacaccgccaccctgctcggccgccggcgttatctgccggatctcaccagttcg
aaccgccagcgccgggagatggccgagcggatggctctcaatgccccgatccagggctcc
gcggccgacatcatcaagctggccatgctcaaggtcgatgatcggctgcgggagtccggt
ctcacctcccggatgctgctgcagatccacgacgagctcctgttcgaggtggcccccggc
gagcgcgacgacgtggaggccctggttcgggaggcgatgggggcggcgatggcgctcgac
gtgccgctggacgtctcggtcggcagtggtcggtcctggcacgaggccgcccactga
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