Raineyella fluvialis: Rai3103_12240
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Entry
Rai3103_12240 CDS
T06259
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
rain
Raineyella fluvialis
Pathway
rain00750
Vitamin B6 metabolism
rain01100
Metabolic pathways
rain01240
Biosynthesis of cofactors
Module
rain_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
rain00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
Rai3103_12240 (pdxS)
Enzymes [BR:
rain01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
Rai3103_12240 (pdxS)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NanE
TetR_C_27
IGPS
Glu_synthase
NMO
OMPdecase
TMP-TENI
IMPDH
Trp_syntA
DHO_dh
PcrB
FMN_dh
Motif
Other DBs
NCBI-ProteinID:
QGF24303
UniProt:
A0A5Q2FGR4
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All DBs
Position
complement(2684257..2685183)
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AA seq
308 aa
AA seq
DB search
MTDTLSPTVPTTGAPTLDDRVAVNTGLARMLKGGVIMDVVTPEQAKIAEEAGAVAVMALE
RVPADIRAQGGVARMSDPDLIEGIIEAVSIPVMAKARIGHFVEAQVLEALKVDYIDESEV
LSPADFVNHIDKTQFSVPFVCGATNLGEALRRITEGASMIRSKGEAGTGDVSEAMKHLRT
IKGEIRGLGAKSDDELYVAAKELQAPYELVRQVAREGKLPVVLFVAGGIATPADAAMMMQ
LGADGVFVGSGIFKSGNPAKRAAAIVRATTHFNDPQVIADASRGLGEAMVGINVADVPAP
HRLAERGW
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgactgacacgctctccccgaccgtccccaccacgggcgccccgaccctcgacgaccgc
gtcgcggtcaacaccggactcgcccggatgctcaagggtggcgtcatcatggacgtcgtc
acgcccgagcaggcgaagatcgccgaggaggccggcgccgtcgcggtgatggctctggag
cgggtccctgccgacatccgcgcccagggtggcgtggcccggatgagcgacccggacctg
atcgagggcatcatcgaggccgtctccatcccggtgatggccaaggcccggatcggccac
ttcgtcgaggcccaggtgctcgaggcgctcaaggtcgactacatcgacgagtccgaggtt
ctctcccccgccgacttcgtgaaccacatcgacaagacccagttcagcgtccccttcgtc
tgcggcgcgaccaacctcggtgaggcgctgcgccggatcaccgagggcgcctcgatgatc
cgctccaagggcgaggccggcaccggtgacgtgtccgaggcgatgaagcacctgcgcacc
atcaagggcgagatccgcggcctcggcgccaagtccgacgacgagctctacgtcgcggcc
aaggagctgcaggcgccgtacgagctggtccgccaggtcgcccgcgagggcaagctcccg
gtcgtgctcttcgtcgccggcggcatcgccaccccggccgacgccgcgatgatgatgcag
ctcggcgccgatggcgtcttcgtcggctcgggcatcttcaagtccggcaacccggccaag
cgtgccgcggccatcgtccgcgcgaccacccacttcaacgacccccaggtgatcgccgac
gcctcccgcgggctcggtgaggccatggtcggcatcaacgtcgccgacgtcccggcgccg
caccggctcgcggagcgtggctggtga
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