KEGG   Raineyella fluvialis: Rai3103_13175
Entry
Rai3103_13175     CDS       T06259                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
rain  Raineyella fluvialis
Pathway
rain00300  Lysine biosynthesis
rain00470  D-Amino acid metabolism
rain01100  Metabolic pathways
rain01110  Biosynthesis of secondary metabolites
rain01120  Microbial metabolism in diverse environments
rain01230  Biosynthesis of amino acids
Module
rain_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rain00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Rai3103_13175 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Rai3103_13175 (lysA)
Enzymes [BR:rain01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     Rai3103_13175 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: QGF24444
UniProt: A0A5Q2FG09
LinkDB
Position
2881598..2883013
AA seq 471 aa
MTHMHVAGSIHADTIAPGPQWLRLPEDVNALLPALWSATVERGPDGVLAVGGLPVTDIAA
RCGTPVYVLDEVDFHQRARGFVEAFAGWDVYYAGKSFLTTAVAGWAVADGLFVDCSTGGE
LTVALRGGVPGERIGLHGNNKSEAEIAMALDAGVGRIIVDSFDEIRRIGRLAADRDVRAR
VMVRVTTGVEAHTHEYIATAHEDQKFGFSIASGQAKEALRACEADPHLDLIGIHSHIGSQ
IFETYGFEVAARRIMMLHAEVAREFDRELPEMDLGGGFGIAYTSLDQPETPERLAAALRA
IVEEQAHDLSVQVPRMSIEPGRAIVGPTTMALYRVGTVKQVVLDGGATRTYISVDGGMSD
NIRPALYGAEYSATLAGRASSAGAVLSRIVGKHCEGGDILVRDEFMPADIAPGDLVAVPG
SGAYSRAMASNYNMVPRPPVVAVRDGVLHTLVRRETIDDLLALDLGYDPVP
NT seq 1416 nt   +upstreamnt  +downstreamnt
atgacgcacatgcacgtcgcgggctccatccacgccgacaccatcgcccccgggccccag
tggctccggcttcccgaggacgtcaatgccctcctgccggccttgtggagcgcgacggtg
gagcggggtcccgacggggtcctggcggtcggcgggctgcccgtcaccgatatcgccgct
cggtgcggcacgccggtgtacgtgctcgacgaggtcgacttccaccagcgggcgcgggga
ttcgtggaggccttcgcgggctgggacgtctactacgcgggcaagtccttcctcaccacc
gcggtggcgggctgggcggtcgccgacgggctgttcgtcgactgcagcaccggcggagag
ttgaccgtcgccctgcgcggtggtgtgccgggggagcggatcggcttgcacggcaacaac
aagtcggaggccgagatcgccatggccctcgatgcgggggtcggccggatcatcgtcgat
tcgttcgacgagatccgccggatcggccgcctggccgcggaccgcgacgtgcgggcgcgg
gtgatggtgcgggtgacgaccggggtggaggcacacacccacgagtacatcgcgacggcg
cacgaggaccagaagttcggcttctccatcgcctccgggcaggccaaggaggcgctgcgc
gcctgcgaggccgatccgcacctggacctcatcggcatccactcgcacatcggctcacag
atcttcgagacgtacgggttcgaggtcgccgcgcgccggatcatgatgctgcatgccgag
gtggcgcgggagttcgatcgtgagctgccggagatggacctcggcggcggcttcgggatc
gcctacacctccctggaccagccggagacacccgagcggctggccgccgcgctgcgggcc
atcgtcgaggagcaggcccatgacctgtccgtccaggtcccgcgcatgtcgatcgagccc
ggccgggccatcgtcggaccgacgacgatggcgctctaccgcgtcgggacggtcaagcag
gtcgtcctggacggaggagccacccgtacctacatctcggtcgacggtgggatgagcgac
aacatccgccctgccctctacggggcggagtactcggcgacactggccgggcgcgcctcg
tccgccggggccgtgctgtcgcgcatcgtcggtaagcactgcgagggcggcgacatcctc
gtccgcgacgagttcatgcccgctgacatcgcccccggtgacctggtcgcggtgccgggg
tccggcgcctacagccgggcgatggcctccaactacaacatggtgccgcgtccgcccgtg
gtggcggtgcgcgacggtgtcctgcacaccctggtcaggcgggagaccatcgacgacctg
ctggcgctcgacctcgggtacgacccggtaccgtga

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