KEGG   Raineyella fluvialis: Rai3103_16240
Entry
Rai3103_16240     CDS       T06259                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
rain  Raineyella fluvialis
Pathway
rain02024  Quorum sensing
rain03060  Protein export
rain03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rain00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Rai3103_16240
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Rai3103_16240
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Rai3103_16240
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rain02044]
    Rai3103_16240
Enzymes [BR:rain01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Rai3103_16240
Secretion system [BR:rain02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Rai3103_16240
  Eukaryotic Sec-SRP protein
   Rai3103_16240
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA cobW AAA_22 nSTAND3 ArsA_ATPase Zeta_toxin AAA_31 AAA_24 APS_kinase AAA_30 MeaB MMR_HSR1 AAA_33 ABC_tran nSTAND_NTPase7 NPHP3_N MobB AAA_16 NTPase_1 AAA_18 ParA Catalase_C TsaE NACHT Thymidylate_kin Flu_M1 Ustilago_mating 6PF2K
Other DBs
NCBI-ProteinID: QGF24910
UniProt: A0A5Q2FCU1
LinkDB
Position
complement(3521494..3523077)
AA seq 527 aa
MFDTLQDRLAATFKNLRGKGRLTDADVDATAREIRIALLEADVNLSVVKEFVNAVKVKAR
NAEVSQALNPSQQIVKIVNEELTEILGGQTRNVRFSKQPPTVIMLAGLQGAGKTTLAGKL
ATWLKREGHTPLLVAADLQRPNAVKQLQVVGERAGVHVYAPQPGNGIGDPVQVARDSITE
AERKLYDVVVVDTAGRLGIDAEMMQQAADIRAAVQPDEVLFVVDAMIGQDAVNTANAFQE
GVGFDGVVLTKLDGDARGGAALSIRKVTGKPIMFASNGEKLEDFDVFHPDRMASRILGMG
DVLTLIEQAERTFDAEQSAKAAAKLASSKGGKEFGLQDFLEQMKAVRKMGPLSKVFGMLP
GMGQLKDQLENIDEKEIDRVEAIILSMTPSERADVTILNGSRRSRIAKGSGVTVSEVNNL
VNRFVEARKMMASMAGGAMGGMPGMPGMPGAPRPGKQQAKKQKKKGTKVSGNPAKRTAEP
TAEVGEAPAASPFGAGALDGADLERTMKDFQLSPELQKMLGQQQRRP
NT seq 1584 nt   +upstreamnt  +downstreamnt
ttgttcgacaccctgcaggaccgcctcgccgcgaccttcaagaaccttcgtggcaagggc
cggctgaccgatgccgacgtcgacgcgaccgcacgcgagatccgtatcgcgctgctggag
gccgacgtcaacctctccgtggtgaaggagttcgtcaacgcggtcaaggtgaaggcccgc
aatgccgaggtctcccaggcgctgaatccctcccagcagatcgtcaagatcgtcaacgag
gagctgaccgagatcctcggcggtcagacccgcaacgtccggttcagcaagcaaccgccg
accgtcatcatgctggccggcctgcagggcgccggcaagacgacgctggcaggcaagctc
gccacctggctgaagcgtgagggccacacgcctctcctggtcgccgccgacctgcagcgg
ccgaacgccgtcaagcagctgcaggtggtcggggagcgtgccggcgtgcacgtctacgcg
ccgcagcccggcaacggcatcggggacccggtccaggtggctcgcgactcgatcaccgag
gcagagcgcaagttgtacgacgtggttgtcgtcgacaccgccggtcgcctcggcatcgac
gccgagatgatgcagcaggcggccgacatccgcgctgccgtgcagcccgacgaggtgctc
ttcgtcgtcgacgccatgatcggccaggacgccgtcaacaccgccaacgccttccaggag
ggcgtcggcttcgacggcgtggtgctgacgaagctggacggcgacgcccgcggtggcgcg
gcgctgtcgatccgcaaggtcaccggcaagcccatcatgttcgcctcgaacggcgaaaag
ctggaggacttcgacgtcttccatcccgaccggatggcttcgcgcatccttgggatgggc
gacgtactgacgctgatcgagcaggccgagcggaccttcgacgcggagcagtccgcgaag
gcggccgcgaagctcgccagctcgaagggcggcaaggaattcggtctgcaggacttcctc
gaacagatgaaggccgtccgcaagatgggcccgttgtccaaggtgttcgggatgctgccc
ggaatgggccagctcaaggaccagctggagaacatcgacgagaaggagatcgatcgcgtc
gaggcgatcatcctgtccatgacaccctccgagcgtgccgacgtgacgatcctgaacggc
tcccgccggtcccggatcgcgaaggggtccggggtcacggtcagcgaggtcaacaacctg
gtcaaccgcttcgtcgaggcgcgcaagatgatggcctcgatggcaggcggggcgatgggc
ggtatgccgggcatgccgggtatgccgggcgcgcccaggcccggcaagcagcaggccaag
aagcagaagaagaagggcacgaaggtctccggcaaccccgccaagcgcaccgcggaaccg
accgcggaggtgggcgaggcaccggccgcgtcccccttcggtgcgggtgcgctggacggc
gcggacctcgagcggacgatgaaggacttccagctgtccccggagttgcagaagatgctc
ggccagcagcagcgccggccctga

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