Raineyella fluvialis: Rai3103_16260
Help
Entry
Rai3103_16260 CDS
T06259
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rain
Raineyella fluvialis
Pathway
rain03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rain00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rai3103_16260 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rain03400
]
Rai3103_16260 (mutM)
Enzymes [BR:
rain01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Rai3103_16260 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Rai3103_16260 (mutM)
DNA repair and recombination proteins [BR:
rain03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Rai3103_16260 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_3
WS_DGAT_cat
Auto_anti-p27
Zn_ribbon_IS1595
Zn_ribbon_TFIIB
NFACT_N
DZR
Motif
Other DBs
NCBI-ProteinID:
QGF24912
UniProt:
A0A5Q2FD93
LinkDB
All DBs
Position
complement(3525732..3526583)
Genome browser
AA seq
283 aa
AA seq
DB search
MPELPEVEVVRRGLAPHLAGRTLAAVEVLHPRPVRRHLGGPDDFAARLVGRTLLEPARRG
KYLWLPLDSGEAILTHLGMSGQFRVDPPGAADEPHVRVRLGFEDGLSEVRFCDQRMFGGL
LVSEADGHVPPEIAHIAPDPFEEAFDPEAVVRAIRRRRTGIKRALLDQTVVSGIGNIYAD
ESLWLARMHYAQATDALSPGRVRELLEAVRRIMARALDQGGTSFDSLYVHVNGESGYFDR
SLNAYGREDLPCPRCGTPIRREAFMNRSSFRCPRCQRLPRNRC
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaactccccgaggtcgaggtcgtccggcgcggcttggcaccccacctcgcggga
cgcaccctcgccgcggtggaagtcctgcatccgcgtccggtccggcgtcacctcggtggt
ccggacgacttcgcggcccgactcgtcgggcgtacgctcctggaacccgcgcgccggggc
aagtacctttggctgccactggactcgggcgaggcgatcctcacccacctgggcatgagt
ggccagttccgggtcgatcccccgggggcggccgacgaaccccacgtgcgggtgcgactc
ggcttcgaggacgggctctccgaggtccgcttctgcgaccagcggatgttcggcggactg
ctggtgagtgaggccgacggccacgtaccgcccgagatcgcgcacatcgccccggaccct
ttcgaggaggccttcgaccccgaggcggtggtccgggcgatccgtcggcgtcggaccggg
atcaagcgcgcactgctcgaccagaccgtcgtttcgggcatcgggaacatctatgccgat
gagtccctgtggctcgcccggatgcactacgcccaggcgaccgacgcactgagcccgggc
cgggttcgcgaactcctcgaggctgtgcgtaggatcatggcgcgagcactcgaccagggc
ggtacatccttcgacagcctctacgtgcacgtgaacggggagagcggttacttcgaccgc
tccctgaacgcgtacgggcgggaggacctgccctgtccccggtgcggcacccccatccgc
agggaggcgttcatgaaccgctcctcgttccgctgcccacgctgccagcggctgccccgg
aaccgttgctga
DBGET
integrated database retrieval system
