Raineyella fluvialis: Rai3103_16325
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Entry
Rai3103_16325 CDS
T06259
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rain
Raineyella fluvialis
Pathway
rain03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rain00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rai3103_16325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rain03019
]
Rai3103_16325
03016 Transfer RNA biogenesis [BR:
rain03016
]
Rai3103_16325
Enzymes [BR:
rain01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Rai3103_16325
Messenger RNA biogenesis [BR:
rain03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Rai3103_16325
Transfer RNA biogenesis [BR:
rain03016
]
Prokaryotic type
tRNA degradation factors
Rai3103_16325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
PCB_OB
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
QGF24923
UniProt:
A0A5Q2FIC5
LinkDB
All DBs
Position
3536443..3538788
Genome browser
AA seq
781 aa
AA seq
DB search
MEGPNVHFAEAIIDNGSYGKHVVRFEAGALAQQADGSAAVYLDGDTMLLSATSAGKHPRE
GFDFFPLTIDVEERMYAAGKIPGSFFRREGRPGTSAVLTARLIDRPLRPSFIKGLRNEVQ
VVITVLALNPNVRYDVVAINAASMSTQISGLPFSGPIGGVRVALIGDQWVCFPTVEQDDE
STFEMVVAGRVLPDGDVAVMMVEAGGGEHMVDLIKAGKKAPTEQVVAEGLEAAKPFIKVL
CDAQARLAAELPKEQREFPVFSDYRDEVYAAVEAAVLDEMREVMAIPAKLDRQDREDALK
AKAVEALLPSFPDAEAEIKAAFKSVQKKVVRHRTLTEGVRIDGRGVRDIRALSADVEIIP
RVHGSALFQRGETQILGVTTLNMLEMEQKIDTLAPENTKRYMHHYNFPPYSTGETGRVGS
PKRREIGHGALAERALVPVLPSKEEFPYAIRQVSEALGSNGSTSMGSVCASTLSLLNAGV
PLRASVAGIAMGLMSEQVEGETKYVALTDILGAEDALGDMDFKVAGTRDFVTALQLDTKL
NGIPSEELAKALLQAREARMTLLDVMGEAIGEPDEMSPYAPRIITMHVPVDKIGEVIGPK
GKVINQMQEDSGANISIEDDGTIYIGATTGEAAEAARSMINAIANPTMPEVGERYLGTVV
KVVNFGAFVSLLPGKDGLLHVTKLRELNDGKRVENVEDVVKVGQKIQVEVTEVDDRGKLS
LAPVVEAKPAAAQADPAEEADDAVEADAPEQEKSERSPRRRRRTHRKPAEGGDSEDTASE
E
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggagggacccaacgtccatttcgccgaagccatcatcgacaacggttcgtacggcaag
catgtcgtgcgcttcgaggcgggggcgctcgcccagcaggccgacggctccgccgcggtc
tacctcgacggcgacaccatgctgctgtccgccaccagcgccgggaagcacccccgggag
ggcttcgacttcttcccgctgaccatcgacgtcgaggagcggatgtacgccgcgggcaag
atcccgggctcgttcttccgtcgtgagggtcgccccggcacctccgccgtcctcaccgcc
cggctgatcgaccgcccgctgcggccgtccttcatcaagggcctgcgcaacgaggtccag
gtggtcatcaccgtcctcgcgctgaacccgaacgtccgctacgacgtcgtggcgatcaac
gccgcctcgatgtcgacccagatctccgggctgccgttctccggtccgatcggcggcgtc
cgcgtcgcgctgatcggcgatcagtgggtctgcttcccgaccgtggagcaggacgacgag
tcgaccttcgagatggtcgtcgccggccgggtgctgcccgacggtgacgtcgcggtgatg
atggtcgaggccggcggcggtgagcacatggtcgacctgatcaaggccggtaagaaggcc
ccgaccgagcaggtcgtcgccgagggcctcgaggccgccaagcccttcatcaaggtgctc
tgcgacgcccaggcccgcctggccgccgagctgccgaaggagcagcgggagttcccggtc
ttcagtgactaccgcgacgaggtctacgcggcggtcgaggccgccgtcctggacgagatg
cgcgaggtgatggcgatcccggccaagctggatcgccaggaccgcgaggacgcgctgaag
gccaaggccgtcgaggctctgctgccctcgttccccgacgcggaggccgagatcaaggcc
gcgttcaagtcggtccagaagaaggtcgtgcggcaccgtacgctcaccgagggcgtccgg
atcgacggccgcggcgtgcgtgacatccgcgccctgtcggccgacgtcgagatcatcccc
cgggtgcacgggtcggcgctcttccagcgcggcgagacgcagatcctcggcgtcaccacg
ctgaacatgctcgagatggagcagaagatcgacaccctggcgccggagaacaccaagcgc
tacatgcaccactacaacttcccgccgtactccaccggcgagacgggccgcgtcggctcc
cccaagcgtcgtgagatcggccacggtgccctcgctgagcgtgcgctggtgccggtcctc
ccgagcaaggaggagttcccgtacgcgatccgccaggtctccgaggcactggggtcgaac
ggctccacctcgatgggctcggtctgcgcctccaccctgtcgctgctcaacgccggtgtg
ccgctgcgcgcgtcggtggcgggcatcgccatgggcctgatgagcgagcaggtcgagggt
gagacgaagtacgtcgcgctgaccgacatcctcggtgccgaggacgccctcggtgacatg
gacttcaaggtcgcgggcacccgcgacttcgtcaccgccctgcagctcgacaccaagctg
aacggcatcccctcggaggagctggcgaaggccctgctgcaggcccgcgaggcccggatg
accctgctcgacgtgatgggcgaggcgatcggcgagcccgacgagatgagcccctacgcc
ccgcggatcatcacgatgcacgtcccggtcgacaagatcggtgaggtcatcggccccaag
ggcaaggtgatcaaccagatgcaggaggactccggcgccaacatctcgatcgaggacgac
ggcaccatctacatcggcgccaccaccggtgaggccgccgaggccgcccgctcgatgatc
aacgcgatcgccaacccgacgatgcccgaggtcggcgagcgctacctcggcaccgtcgtc
aaggtcgtcaacttcggcgccttcgtctccctgctgccgggcaaggacgggctgctgcac
gtgaccaagctgcgtgagctcaacgacggcaagcgcgtggagaacgtcgaggacgtcgtc
aaggtcggccagaagatccaggtcgaggtcaccgaggtcgacgaccgcggcaagctctcc
ctcgccccggtcgtcgaggccaagcccgcggccgcccaagcggaccccgctgaggaggcc
gacgacgccgtcgaggccgacgcccccgagcaggagaagtcggagcgttcgccgcgtcgt
cgccgtcgtacgcaccgcaagcccgccgagggcggcgactccgaggacactgcctccgag
gagtga
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