Raineyella fluvialis: Rai3103_16360
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Entry
Rai3103_16360 CDS
T06259
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rain
Raineyella fluvialis
Brite
KEGG Orthology (KO) [BR:
rain00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rain03016
]
Rai3103_16360 (truB)
Enzymes [BR:
rain01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Rai3103_16360 (truB)
Transfer RNA biogenesis [BR:
rain03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Rai3103_16360 (truB)
Prokaryotic type
Rai3103_16360 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QGF24930
UniProt:
A0A5Q2FCW0
LinkDB
All DBs
Position
complement(3545395..3546330)
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AA seq
311 aa
AA seq
DB search
MAAARNQGPSGLIVVDKPAGMTSHDVVARARRLIGTRKVGHAGTLDPMATGVLILGVNRA
TRLLGHLALHDKAYDATIRLGQTTVTDDAEGEVLTAPGAAGVTDDAIRAAMTALTGDIAQ
RPSAVSAIKVGGQRSYARVRAGEQVELASRPVTVSRFELIARRDADVAGLTVIDLDVTVE
CSTGTYVRALARDLGEALGTGGHLTALRRTRVGGFGLDVAQPLPDRDDASDASAQKGPRL
AVLELDDAARNCFPWMTVDDRTADDVGHGRALPGIALPAPLTALFGPDGTFLALYRQVGP
DARPEAVFAPS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtggccgcagccaggaaccaggggccgtccggcctgatcgttgtcgacaagccggccggg
atgacctcccatgacgtggtcgcccgtgcccgtcggctgatcggcacccggaaggtcggc
catgccgggacactggacccgatggcgaccggggtgctcatcctcggggtcaaccgggcg
acgcggttgctcggccacctggccctgcacgacaaggcgtacgacgccaccatccggctc
ggccagacgaccgtcaccgacgacgccgagggcgaggtcctcaccgctcccggcgcggcg
ggtgtgaccgatgacgcgatccgggcagcgatgacggccctcaccggcgacatcgcccag
cgaccctccgccgtctcggcgatcaaggtcggcggccaacggtcgtacgcacgggtccgg
gcgggggagcaggtcgaactcgcctcccggccggtgacggtgtcgcggttcgagctcatc
gcccggcgcgacgccgacgtggcggggctgacggtcatcgacctggacgtgacggtggag
tgctccaccgggacgtacgtgcgagcgcttgcccgtgacctcggtgaggcactcggaaca
ggagggcatctcaccgcgttgcgccggaccagggtcggcggtttcgggttggacgttgcc
cagccgctgcccgaccgtgacgacgcctccgacgcgtccgcccagaagggcccgcgactg
gccgtcctggaactggacgacgcggcgcgtaactgcttcccgtggatgacggtcgacgac
cggacggccgacgacgtcggccatggtcgggccctgccgggcatcgcgctgcccgcgccg
ctgaccgccctgttcggtccggacgggaccttcctcgcgctgtatcgtcaggtcggcccc
gatgcccgccccgaggccgtcttcgcgccgagctga
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