Rothia aeria: RA11412_0109
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Entry
RA11412_0109 CDS
T05268
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
raj
Rothia aeria
Pathway
raj03420
Nucleotide excision repair
raj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
raj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RA11412_0109
03430 Mismatch repair
RA11412_0109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
raj03400
]
RA11412_0109
Enzymes [BR:
raj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RA11412_0109
DNA repair and recombination proteins [BR:
raj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RA11412_0109
MMR (mismatch excision repair)
Other MMR factors
RA11412_0109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_25
ResIII
Rab3-GTPase_cat
Motif
Other DBs
NCBI-ProteinID:
BAV86408
UniProt:
A0A2Z5QVI6
LinkDB
All DBs
Position
complement(102226..105096)
Genome browser
AA seq
956 aa
AA seq
DB search
MSEPTNSASGVDPAADTLFADLENTQPPYDPEYDARIPPEDSFAPEEDPFAHESFMSELN
PEAVTSQTVTAHEDALGEFMPPAYRVGGYGSEYNPEDPYGERTYSLSTIDPATLIDGLND
RQREAVLHAGSPLLIVAGAGSGKTRVLTHRIAHLLATGRATPGQILAITFTNKAAAEMRE
RIQALIGPRAQHMWISTFHSFCVRVLRREAKALGLKSTFTIYDSADSQRLLTLIIKELNL
DTKKFAPKAVGHRISALKNELVSAEEYSAAAANNPWEKTIAQIYTIYTQRLRAANSLDFD
DLIGKTVFLLKKFPEIANYYRRKFRHILVDEYQDTNHAQYALVRELVGAHPQGNTREQGP
YPDAPPPGELTVVGDSDQSIYAFRGADIRNITDFESDYPNAHIILLEQNYRSTQNILSAA
NAVIERNPNRRPKKLWTASGEGTKIVGYVAESEHAEARYIAQEIDRLADEHGIKPSDVAI
FYRTNAQSRALEELLMRAGLPYRVVGGTRFYERKEIKDALAYLRALSNPDDDVSVRRILN
EPKRGIGAKSETVVADYASAQRISFFAAARAAAAEPGSVPGLGAAAVKKYAQFVKLMDDL
AQIARTESAATTLEAVLEQSGYLAALRESKDIQDESRVENLSELLDAMVEFEAENPGADL
EQFLEHVSLVADADSIPSRGASADGQTPSAEQIAAEAAEAKAQGMITLMTLHTAKGLEFP
VVFLTGLEHGLFPHQRALTDEGEMSEERRLAYVGLTRAMQRLYITRSETRTMWGKSQFNP
PSPFLEEIPEELIEWRRLGGFAGFGASGMGAYANGASGYGGYGQGGYRGASGYSSGGGRN
ADGHGFDGGSAGGYGTGYEDSRSRANREPSTAEVNGSASYGLAAAASASGAVRNRSRVHQ
GKEIPQLKVGDTVRHKSFGEGRVLALEGTGDKTVAKVRFASEEKRLLLRYAPVEKV
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacccaccaactccgcatccggcgttgatcctgccgcagataccctctttgcc
gatctcgaaaacacgcagccgccctacgatcccgaatatgatgcccgtattccgccggaa
gatagtttcgcaccggaagaagaccccttcgctcacgaatcttttatgtcagagctcaac
cctgaagcggtgacctcccaaaccgtcaccgcccatgaggatgcgctcggcgagttcatg
ccgcccgcctaccgagtgggcgggtacggaagtgagtacaatcccgaagacccttacggg
gagcgcacctattcgctcagcactatcgaccccgcaaccctgatcgacgggcttaacgac
cggcagcgcgaagctgttttacacgccggttcacccctgttgatcgtcgccggggccggg
tctggtaaaacccgcgtgctgacgcaccgcatcgcccatctgctcgcaaccgggcgggcg
actccagggcagattctcgccatcaccttcacgaacaaggccgcggcggaaatgcgtgag
cgcatccaagcgctgatcggcccgcgtgcgcagcacatgtggatttcaactttccatagt
ttctgcgtgcgcgtgctgcgccgggaagccaaggcactcggactcaaatctaccttcacg
atctatgattcggcggattcgcagcgcctgctcacgctcattatcaaagagctgaacctg
gacaccaaaaagtttgcccccaaggccgtagggcacaggatttctgccctcaaaaacgag
ctggtgagcgccgaagaatacagtgcggcggccgcgaataacccgtgggaaaagactatc
gcacagatttacaccatctacacccagcgccttcgcgccgcgaactccctcgactttgac
gacctcattggcaaaaccgtgtttttgctcaagaagttccccgaaatcgcaaactattat
cgccgtaagttccggcatattctggtggacgaataccaagataccaaccacgcccagtac
gcgctcgtgcgggagttagtgggggcgcatccgcagggaaacactcgcgagcagggaccg
tacccggatgctccgccgcccggcgaactgaccgtcgtgggcgactcagaccagtcgatt
tacgccttccgcggcgccgacattcgcaatattacggatttcgagagcgactaccccaac
gcacacattattctgctggagcagaactaccgttccacgcagaacattctctctgccgcg
aacgccgtgattgaacgcaaccccaaccgccgccccaagaagctgtggacggcatcgggg
gagggcaccaaaatcgtggggtacgtcgccgaatccgaacatgcagaggcacgctatatc
gcccaagaaatagaccggcttgccgatgaacacggcatcaaaccctcggatgtggcgatt
ttctaccgcaccaacgctcaatcccgggccctcgaagaactcctgatgcgcgccggactg
ccgtaccgcgtggtcggcggcacccggttctacgagcgcaaagaaattaaagatgcgctc
gcctacctgcgcgccctctcaaacccggacgacgacgtgagcgtgcggcgtattctcaac
gaacctaaacgcggtatcggtgcgaaatctgagaccgtggttgccgattatgcttcagca
cagcgaatttctttcttcgccgccgcccgtgccgctgccgccgagccggggagcgtgccg
ggtttgggcgctgccgccgtgaaaaagtatgctcagttcgtcaagctcatggacgacctc
gcccagattgcgcgcaccgaatcagccgccacaaccctagaagcggtgctcgaacagtcc
ggctatctcgccgccctgcgcgaatctaaggatattcaggacgaatcccgggtggaaaac
ctctcggagctgctggatgcgatggtcgagtttgaggcggagaaccccggcgcggactta
gaacagtttttagagcatgtctcgctggtggcagatgccgactcgattccgtcccggggt
gcctccgccgacggtcagaccccgtccgccgagcagattgccgccgaggccgcagaggcg
aaggcgcagggcatgattaccctgatgaccctgcacaccgctaaaggcctggagttcccg
gttgttttcctgaccgggctggaacacgggctgtttccgcatcagcgggcgctgaccgac
gagggtgagatgagcgaggaacgccgccttgcctatgtggggctcacgcgcgcgatgcag
cggctctacatcacccgctccgagacccgcacaatgtggggcaagagccagttcaacccg
ccctcacccttcctggaagagattcccgaggagctgatcgagtggcgccgcctgggcggt
tttgccgggtttggtgcctccgggatgggggcatacgccaacggtgccagcgggtatgga
ggctacgggcagggcggctaccgcggggcgagcggatacagctccggcggtgggcgcaat
gctgatgggcacggttttgacgggggcagcgcgggcggctatggcacgggatacgaggac
tctcgctcccgggcgaaccgtgaaccatcaaccgctgaggtcaatggttcggcaagctac
gggttggcggccgcagccagcgcatccggagcggtgcgtaaccgctcgcgggtgcatcaa
ggcaaggaaattccgcagctgaaggtgggcgatacggtgcggcataaatcctttggcgag
ggccgggttcttgccctggaaggtactggcgataagaccgtggcgaaggtgcgttttgcc
tccgaggagaagcgtctgctgctgcggtacgcaccggttgagaaggtctag
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integrated database retrieval system
