Rothia aeria: RA11412_1416
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Entry
RA11412_1416 CDS
T05268
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
raj
Rothia aeria
Pathway
raj03030
DNA replication
raj03430
Mismatch repair
raj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
raj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RA11412_1416
03430 Mismatch repair
RA11412_1416
03440 Homologous recombination
RA11412_1416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
raj03032
]
RA11412_1416
03400 DNA repair and recombination proteins [BR:
raj03400
]
RA11412_1416
Enzymes [BR:
raj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RA11412_1416
DNA replication proteins [BR:
raj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RA11412_1416
DNA repair and recombination proteins [BR:
raj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RA11412_1416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
GOLD_2
Motif
Other DBs
NCBI-ProteinID:
BAV87715
UniProt:
A0A2Z5QZ02
LinkDB
All DBs
Position
1303199..1306735
Genome browser
AA seq
1178 aa
AA seq
DB search
MAKKGFAHLHVHTEYSMLDGAARLSDLFTHTRELGMDSIATSDHGFLFGAFDFWRQAKAN
DVKPIIGVEAYLTPGTHRSDRSRVRWGDGSRDDVSGGGAYTHMTMWAETTEGMHNLFRAS
SIASLEGQLYKPRMDREVLQTYSKGLIATTGCPSGEIQTRLRLGQYQEAVAAAAEFRDIF
GKGNFYCEVMDHGLSIEKNVAADLMRLAKELDLPFVATNDLHYTKHEDYNAHAALLCVQS
GSTLEDPNRFKFDADNFYLRSPEEMYSIFGDIPGACENTLEIAERCNVEFNTKANYMPNF
PVPEGESEESWFVKEVEAGLHYRFPNGIPDEVRKQANYEVEVITSMGFPGYFLVVADFIN
WAKRNNIRVGPGRGSGAGSMVAYAMRITELNPLRHELIFERFLNPDRVSMPDFDVDFDDR
RRPEVIHYVTEKYGEDKVAQIVTFGTIKAKQALKDASRVMGYPYSVGERLTKAMPPDVMG
KNIALANVYNKDDKRYAEAGDLRELIETDDVSGKVFKTAQGLEGLKRQWGVHAAGVIMSS
EVLTEVIPVMRREADGQVITQFDYPTCEGLGLIKMDFLGLRNLTIISDAIENIKANRNFD
LDLETLELSDKASYELLARGDTLGVFQLDGGPMRSLLKLMEPEEFEHISAVLALYRPGPM
GANSHTNYALRKNGKQEITAIHPELEEPLSDILGTTYGLIVYQEQVMAIAQKVANYTLGE
ADLLRRAMGKKKKAELDKQYATFHDGMISNGYSEGAVKALWDILLPFSDYAFNKAHTAAY
GLVSYWTAYLKAHYPQEYMAALLTSVGDNKDKLAMYLNECHRMGITVLPPDVNESELTFA
PVGDDIRFGMGAVRNVGANVVDGMITARNEKGRYESFSDFLQKVPLSVCNKRTIDSLIKA
GAFDDLGHTRRSLALMHEEAIDAAVSVKRKEAAGQFDLFGSLGMGEELGEDLSVSVPDVP
EWERRDKLNFERDMLGLYVSDHPLRGLERALSDASSTSIHDIMEEESHIKDGEFVTIAGM
LTGVSRRIAKSSGNQYATAELEDPSGVTITVMFFARTYETVGGVLADDLICSVRGRVQRR
DDGSVNISAQELTILELTEDGRTGPVTIAIPEYRATESNLVHLRDVLLDHRGSTDVRLAL
RGREKEQLVLLEAKLRVEPNPSLFGEIKTIFGPGCIRR
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaaaaaggcttcgcacacctgcatgtgcacaccgaatactccatgctggatggt
gccgcgcgactgagtgacctctttacgcacacccgtgagctcggtatggactccatcgcc
accagtgatcatggtttcttattcggcgccttcgacttctggcggcaggcaaaagctaat
gacgtgaaacccattatcggggtggaagcgtacctgactcccggaacgcatcgtagtgac
cgttcccgtgtgcggtggggagacggttcccgcgatgatgtttctggtggtggcgcatac
acacacatgaccatgtgggcggaaaccaccgagggtatgcacaacctattccgggcttcc
tctatcgcctccttggaagggcagctgtataagccgcgcatggaccgtgaggtgctgcaa
acttactccaaaggtttgattgccaccaccgggtgcccttcaggtgagattcagacgcgt
ctacgcctgggacagtatcaggaggcggttgctgccgccgcagaattccgcgatattttc
ggtaagggtaacttctattgtgaagtgatggatcacggcctgtctattgagaaaaatgtg
gctgctgatctgatgcgcctcgctaaagaacttgacctgccgtttgtggcaactaacgat
ctgcactacaccaaacacgaagactacaatgcgcacgcggcgctgctgtgcgtacagtca
ggctcaaccctggaagaccccaatcgcttcaaatttgatgcggataacttttacctgcgt
tcacctgaggagatgtactccatctttggcgatattcccggggcatgcgagaacaccctc
gaaatcgctgagcggtgcaacgtcgagttcaacaccaaagcgaactatatgccgaacttc
ccggtgcctgagggagagagcgaagaatcatggttcgtgaaagaagttgaggcggggctg
cattaccggttccccaacggcatccctgatgaggtacgtaaacaggcgaattatgaggtt
gaggttattacctcaatgggcttccccggctacttcttggtggtggcggacttcattaac
tgggcgaaacgcaataatattcgtgtgggcccggggcgtggctccggtgcggggtcgatg
gttgcgtacgctatgcgcatcaccgagctgaacccgctgcggcacgaactgatttttgag
cggttcctgaaccctgaccgcgtctcaatgcctgacttcgacgtggactttgacgatcgc
cgccgccccgaggtgatccactatgtgactgagaagtacggtgaagataaggtcgcgcag
atcgtcaccttcggcaccattaaagcgaagcaggcgctcaaagacgcctcccgagtgatg
gggtacccttactcggtgggggagcggctcaccaaggcaatgccgccggatgtgatggga
aagaacattgccctagcgaacgtctacaacaaagacgataaacgctacgccgaagcagga
gatttgcgtgagctcatcgaaaccgacgacgtttcgggcaaggtttttaaaaccgctcag
ggccttgaaggcctaaaacgccagtggggcgtgcacgctgccggtgtgattatgtcctcg
gaggtactcaccgaagtcatccctgtgatgcgccgtgaagcagatgggcaggtgatcacc
cagtttgattaccccacctgtgaggggctgggcctgattaagatggactttctggggctg
cgtaacctcaccatcatctcggacgctattgaaaacattaaagctaaccgtaattttgac
ctcgacttagagacgcttgagctgagcgataaagcatcctacgagctgctggcgcgcggt
gatacgctgggcgtgttccagctcgatggcggaccgatgcgctcgcttctgaagcttatg
gagcctgaagagtttgagcatatttccgctgtgcttgctctctaccgtcccgggccgatg
ggggcgaactcgcatacgaactatgcgctgcgcaagaacggtaagcaggagattacggcg
atccatcccgaactggaggagcctctttccgatattttgggtaccacgtacggtttgatc
gtgtaccaggaacaggtgatggcgatcgcccagaaggtggcgaattacacccttggtgag
gcagatcttttgcgccgcgcaatgggtaagaagaaaaaggctgagctggataaacagtac
gccacgttccacgatggcatgatttcgaacggatactctgagggcgcggtaaaagccctg
tgggatattctgctgccgttttccgattacgcgtttaataaggctcatacggctgcttac
gggctggtttcatactggaccgcatacttgaaagcgcactacccgcaggagtacatggct
gcgctgctgaccagtgtgggcgataacaaagataagcttgccatgtacctgaacgagtgc
caccgtatgggtattaccgtgctgccgcctgatgtgaatgaatcggagctaacgttcgcc
ccggtgggtgacgatatccgcttcggcatgggcgcagtccgtaacgtgggcgcgaacgtg
gtggatggtatgattaccgcccgcaatgagaagggccggtatgagtcgttcagcgatttc
ctgcaaaaagtgccgttgagcgtgtgcaataagcgcaccattgattcgctcattaaagcg
ggtgcgtttgacgatctggggcatacccgccgttctcttgcgctcatgcatgaggaggca
attgatgcggctgtctcggtgaaacgtaaggaagccgccgggcagtttgacctgttcggt
tccctcgggatgggggaggaactgggcgaggatctgtcggtatcggtacctgatgttccc
gagtgggaacggcgcgataagctcaactttgagcgtgacatgctggggctgtacgtctcg
gatcacccgttgcgcgggctggaacgcgccctttccgatgcgtccagcacctcgattcac
gacattatggaggaagaatcccacattaaagacggcgagttcgtcacaatcgccgggatg
ctcacgggcgtgtcacggcgtatcgctaagtcaagcggtaaccagtacgccactgccgag
ctggaagacccctcgggggtgacgatcaccgtcatgttctttgcccgcacctatgagacg
gtgggtggggtactcgctgatgatttgatctgctcagtgcgtggacgtgtacaacgtcga
gacgacggcagtgtgaatattagtgcccaggagctgacgatcctggagcttaccgaggat
gggcgtaccggcccggtgacgatcgctatccccgagtatcgtgccaccgaatcgaacctg
gtgcacctgcgggatgtgctgcttgatcatcggggttcgacggatgtgcgcctggccctg
cgcggtcgggagaaagaacaattggtgctgttggaggctaagctgcgggtggaaccaaac
cccagtttattcggtgagattaagacgattttcggccccgggtgcatccgccgctag
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