Rothia aeria: RA11412_1457
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Entry
RA11412_1457 CDS
T05268
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
raj
Rothia aeria
Pathway
raj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
raj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RA11412_1457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
raj03021
]
RA11412_1457
03019 Messenger RNA biogenesis [BR:
raj03019
]
RA11412_1457
Transcription machinery [BR:
raj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
RA11412_1457
Messenger RNA biogenesis [BR:
raj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RA11412_1457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
DUF7440
NACHT
CoV_NSP2_C
Motif
Other DBs
NCBI-ProteinID:
BAV87756
UniProt:
A0A2Z5QZH2
LinkDB
All DBs
Position
1352670..1354643
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AA seq
657 aa
AA seq
DB search
MAKNIVVTEDENASGTLVTSSKLGELKVAQLRTLAQQLGIKGYLRLKKADLVEAVASHQR
GGVVAERDETDAEKKSEKTEKTPSSKAEKSEKSEGEKAPAKRTRATRTRKTQEAKKAEKT
AKADADLPPLDVKAELASEKIRERREQRELPENSADLKAETADGATSLDSITAALDMTFG
TDPEKPVKRTRTRERTNNRRKSEEAESTEQNERTYRRTNKRERYEKNERYEKNNDRQAKA
DRSNSNDDERRNRRNKRTNEQRERRNNRGFDNKVSENDVLAPISGILEILDNYAFVRTSG
YLPGPDDVYVSLAQVKHFRLRKGDHILGAIRVPREGEQNSRQRFNALVQIEAINGQSVED
STRRREFSKLTPLYPKERLRLETDKKKLGPRVVDLVSPIGKGQRGLIVSPPKAGKTLMLQ
SIANAITENNPEVYLMMVLVDERPEEVTDMQRTVKGEVIASTFDRPAEDHTTVAELAIER
AKRMVELGYDVVVLLDSMTRLGRAYNLAAPASGRILSGGVDSAALYPPKKFFGAARNIEE
GGSLTILATALVETGSKMDEVIFEEFKGTGNMELRLSRQLADKRIFPAVDVTASGTRREE
NLLSGEEVKIMWGLRRVLAGMEPEQALSVLTNQLRKTETNAEFLMTVQKNGLRMSPN
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaaatattgtcgtgactgaagacgaaaacgcgtcgggcacactcgtaacgagc
tcgaagcttggcgagctgaaagtcgctcagctacgcaccctagcccagcagttgggcatt
aaagggtacctgcgtctgaagaaggcggatctggttgaggctgtggcgtctcaccagcgc
ggaggcgtggtggctgaacgcgatgagaccgacgctgagaaaaagagcgaaaagaccgaa
aaaactccttcctctaaggctgaaaagtccgaaaagagtgagggcgagaaggcacccgca
aagcgaacccgcgccacgcgtacccgtaaaacgcaggaggctaagaaagccgaaaagacc
gctaaggcggatgcggaccttcctcccctggacgtgaaggcagagctggcttccgagaaa
attcgtgagcgccgcgaacagcgtgaactccccgagaactccgccgatttgaaggccgaa
accgcagacggggcaaccagcctggattccattaccgccgccttggatatgacgttcggt
accgacccggagaaaccggtgaaacgcacccgcacccgtgaacgcaccaataaccgccgt
aagagcgaagaggctgaaagcaccgagcagaacgagcgcacctaccgccgcaccaataag
cgcgaacggtacgagaaaaacgagcggtacgagaagaataatgaccgccaggccaaggcc
gatcgttctaactctaacgacgatgagcgccgtaaccgccgcaataagcgcactaatgag
cagcgggagcgccgcaataaccgcgggttcgataataaagtcagcgaaaacgatgtgctg
gcaccgatctccggcatcctcgaaatcctcgataattatgcatttgtgcgcacctcaggc
tatttgccgggcccggatgacgtgtacgtttcgctggctcaggtgaagcatttccgcctg
cgtaaaggcgaccatattctgggtgctatccgggtgccgcgtgaaggggagcagaactcc
cgccagcggttcaacgcactggttcagattgaggcgattaacggtcagagcgttgaagac
tcgacgcgccgccgtgaattctcaaagctcaccccgctgtaccccaaggagcgtttgcgc
cttgagaccgataagaagaaactgggcccgcgcgtagtggacctggtgtccccgatcggt
aagggccagcgcggcctgattgtttcacccccgaaggcgggtaagactcttatgctccag
tcgatcgcgaatgcgatcacggagaataaccccgaagtgtacctcatgatggtgctggtg
gatgagcgccccgaagaggtgaccgatatgcagcgcacggttaagggtgaggtgatcgcc
tcaaccttcgaccgtcccgctgaagaccacaccacggtcgcggagctcgctattgagcgc
gcgaagcgtatggttgagctcggctacgacgtggtggtgctgctggattcgatgacccgt
ctggggcgtgcctacaacctggcggcgcccgcatccggccgtatcctctccggcggtgtg
gattctgccgcgctgtatcctccgaagaagttcttcggtgcggcccgcaacattgaagag
ggcggttcgctgactattctggcgacggctctggtggagaccggttcgaagatggacgag
gtgatctttgaggagttcaagggcaccggcaatatggagctgcgcctgtcgcgccagctg
gcggataagcgtatcttccccgcagtcgatgtgaccgcctccggtacccgccgtgaggag
aacctgctcagcggcgaagaggtgaagatcatgtggggtctgcgccgcgtgctggctggt
atggagccggagcaggcgctgagcgtgctgacgaaccagctgcgaaagaccgaaacgaac
gccgagttcttaatgaccgtgcagaagaacggccttaggatgagccccaactag
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