Rothia aeria: RA11412_1515
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Entry
RA11412_1515 CDS
T05268
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
raj
Rothia aeria
Brite
KEGG Orthology (KO) [BR:
raj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
raj03400
]
RA11412_1515
DNA repair and recombination proteins [BR:
raj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RA11412_1515
Archaeal homologous recombinant proteins
RA11412_1515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
TsaE
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BAV87814
UniProt:
A0A2Z5R020
LinkDB
All DBs
Position
1402527..1405742
Genome browser
AA seq
1071 aa
AA seq
DB search
MLIHRLEFRAFMAYPHHEKIDFERLNDAGIFLLNGPTGAGKTTVLDAICYAIYGTVSSQR
AESELRSIFAGRDVAPFVELELTVQGRRLRIHRTPAWMRPKKRGTGLTQEKATHHVSRLR
PGADPLEAASWEEVGNRHRESAEYVQTLIGLTREQFLKVMLLPQGDFSKFLRTVGRERQE
LLKKLFPIETYERIVERLNELARQAHDGAHDAAQALDTLRDEGVNSLARLKQQLPPLDEE
PAAAPEEEAARAVTDGHKPHEQGQEPPAIDPLQLPAAEFTDWVRHQLTLTLRGGEAEDTR
RASIEQRIAAQREKLHELTALSRDWAEYESLTADKERLEEQKQDRHADKTTLETARAAEP
VHSAITRAEADQAANEQELTGAVEKHRAAHDIAETQLGILKPGPGGKEPLEARAYRLTAA
ATQPHNVEYEELATLISSCLSELKGYRKDDQALTAARAEQRSAEETYTTACAAVTTLTEE
THQAVTAKEKAGQDLDAFAGVEEALARAQTAAAAARETLEQAQRHAQRLAEASAEVQRTE
TLYAAAHAAANTARQRVTELSSARMSQAALSLAKNLQQGQECMVCGSLQHPNPATGAPNE
TLIEQADIDAACEASDTANAAESAAHSAHTKARTVLEQLTETRAVTPQAAATRLSEAEHA
LTSAEQAHTAKQAAQQKLKALEQQLEVLAKKNTEAARMQAAARAQAEAAQERVMALEASL
EPVRARADFTQRIEALERYFSAVRAAETAVTRAEEAAKRAAQSTAGAQAALEDSPFDTVE
TVRAAVLSGTEQKAIQERLTEYERQLTRVSSALEREAMRDIARRAAAGQSAPEAAEREKV
GERISGLEKTRDELLARHTLRESGEEHLKEFIVRFEKQHARSAQAIARHELYGSLAAVAS
ASSANNTRRIDLVNYVLAGEFQAVVRAASAHLKQMSGGRFTLVHSEDKEAKERTSLGLGV
RVFDTWQGTDRRTASLSGGETFMASLALALGLAEIVQENNGGVEIDTLFIDEGFGTLDGE
TLEQVMSTIDGLRENGRTIGLISHVEEMKNRIQAQVVVSKGQGGSTLRVDF
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgctcatccaccgactagagttccgcgccttcatggcgtacccccaccacgaaaaaatc
gattttgagcggcttaacgacgccggtatattcctgctgaacggtcccaccggcgccggt
aaaaccacggtgctggacgccatctgttacgcgatctacggcactgtctcgtctcaacgg
gccgaaagcgagctgcgttccattttcgctggccgtgatgtggcgccttttgtggaactg
gaactgacggtgcaggggcggcggttacgtattcaccgcacccccgcctggatgcgcccc
aaaaaacgcggcaccgggctaacacaggagaaagccacccaccatgtgagcaggctgcgc
cccggggcagacccgctggaggccgccagctgggaggaagtcggcaaccgccaccgtgaa
agcgcggagtacgtgcagaccctgattgggctcacccgtgaacaatttctgaaggttatg
ctgctgccgcagggggacttctcgaagtttctgcgcaccgtggggcgagaacgccaagaa
ctactcaagaaactgttccccatcgaaacgtatgaacgtattgtggagcgcttgaatgag
cttgcgcgtcaggcacacgatggggctcatgacgccgcccaggcgctggatacattacgg
gatgagggggtgaactctctagcacgtttaaaacagcagctaccgccgcttgacgaagaa
cccgcagccgcacccgaggaagaagcagcccgggcggtaacggacggtcataagccgcac
gagcaggggcaagagccgcccgcgattgacccgctgcagcttcccgccgcagagtttacg
gactgggtgcggcaccagctgacactcaccctgcggggtggggaggcggaagatacccgc
cgcgccagcattgaacagcgtattgctgcacagcgtgagaaactgcatgaactaacggct
ctgagccgtgactgggcggaatatgagagcctcaccgccgataaggaacgcctcgaagaa
cagaaacaggaccgccacgccgataaaaccactcttgagacagcccgcgccgccgaaccc
gtgcacagcgccatcacccgcgctgaagccgatcaggcagcgaacgagcaggagctcacc
ggcgccgtcgaaaaacaccgtgcggcacatgacatcgccgaaacccaactggggatccta
aagcctggccccggcgggaaggagcccttagaggcccgcgcctaccggctcaccgcagca
gcgacgcagccccacaacgtggaatatgaggaactagccacgctcattagctcctgcctg
tcggagctcaaagggtaccgtaaagacgaccaggcgctcaccgcggcccgcgctgaacag
cgcagcgccgaagagacgtacaccaccgcctgcgcggccgtcactacgctgaccgaagag
acgcatcaggcggttaccgcaaaggagaaggccgggcaagatcttgacgccttcgccggg
gtggaggaggccctagcccgggcacaaaccgccgccgctgctgcgcgggaaacgctggaa
caggcgcagcggcacgcccagcgccttgccgaggcgtcagcggaggtgcagcgcacagaa
accctgtacgcagccgcccatgctgccgctaatacggcacgtcagcgcgttaccgagctc
agcagtgcacgcatgagccaggcggcgctgagcttggcgaagaacctgcagcagggtcag
gagtgtatggtgtgcggttcgctccagcaccccaaccccgccaccggtgcccccaacgaa
accctcatcgaacaggctgatattgatgcggcctgtgaggcgtcggatacggcgaacgca
gctgaatccgccgcgcactcggcacacactaaggcgcgcacagtgctggagcagctcacc
gaaacccgcgccgtaacccctcaggctgctgctacacgcctgagcgaggcggagcacgcc
ctcacctccgccgaacaggcgcacaccgcaaaacaagctgcgcagcaaaaactcaaggcc
ttagaacagcagcttgaggtgctcgctaagaaaaatactgaggctgcccggatgcaagcc
gcagcccgcgctcaggctgaggccgcccaggagcgtgttatggcgctggaagcatccctg
gaaccggtgcgtgcccgggctgatttcacccaacgcattgaggccctcgaacgctacttt
agcgccgtgcgggcagccgaaactgctgtcacccgtgcggaagaagccgctaaacgcgcc
gcgcagagcaccgctggggcacaggccgcactggaagattccccctttgacacagttgag
actgtgcgcgctgccgtgctgtcgggtaccgagcagaaggctattcaggagcgccttacc
gagtatgagcggcagctgacccgagtctcttcggctcttgagcgtgaggctatgcgcgat
attgcgcggcgtgcagccgccgggcagagcgcccctgaagcggcagaacgtgagaaagtg
ggtgagcgtattagcggtttggagaaaacccgtgatgagttgctggctcgccacacgctg
cgtgagagtggtgaagagcatcttaaggagttcattgtacggtttgagaagcagcatgcc
cgcagcgcccaggctatcgcacgtcatgagctgtacggttcgttggcggcggtggcgagc
gcatcctccgcgaataatacccgccggatcgacttggtgaattatgtgcttgcgggcgag
tttcaggcggtggtgcgggccgcttcggcgcatttgaagcagatgagcggcggcaggttt
accctggtgcatagtgaagataaggaagctaaagagcgaaccagcctggggctgggggtg
cgtgtttttgatacgtggcagggcaccgaccgccgtaccgcctcgctctcggggggtgag
acgttcatggcctcactcgctcttgcattggggctggccgagattgtgcaggaaaacaat
ggcggggttgagattgacactctgtttattgacgaaggttttggtactcttgacggtgaa
accctagagcaagtgatgtccactattgatggtttacgtgagaatggccgcactatcggg
ctgatttcgcatgttgaagagatgaagaatcgtatccaggcgcaggttgtggtgagtaaa
gggcagggcggctcaactttacgggtagacttctag
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