KEGG   Rothia aeria: RA11412_1557
Entry
RA11412_1557      CDS       T05268                                 
Name
(GenBank) CRISPR-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
raj  Rothia aeria
Brite
KEGG Orthology (KO) [BR:raj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:raj02048]
    RA11412_1557
Enzymes [BR:raj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RA11412_1557
Prokaryotic defense system [BR:raj02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    RA11412_1557
SSDB
Motif
Pfam: Cas3_HD Cas3-like_C_2 Cas3_C DEAD ResIII Helicase_C AAA_30
Other DBs
NCBI-ProteinID: BAV87856
UniProt: A0A2Z5QZR7
LinkDB
Position
complement(1445631..1448615)
AA seq 994 aa
MTVENTKHPSQLATAETSSLWAKTGTDETPSIGLSLPQHMTDAGSVAAELWDKWLSPGAK
QRIMKMLNLTQDEAKSFACWVAATHDIGKATPEFAGQLDSRGREELRVFRDRIEEHKFNF
PNHLTTPPAGTRCPHSTYSQSILIKLLTEHYTDDAETAGTIASIAGAHHGVPAAYTPGTP
GQDFAIFEALNDKWHQAWHELFEMTLEQTGADQVLQKLMSGTKIPVAVQLYLTGLVIMAD
WIASNPTFFPMGTFDVEAQRKRLNQGWDTLGLEHPWGAYTGDAAASDLYSSRFGWKNPTL
RPMQEVVANAARAMKGGGMMCIEAPMGQGKTEAGLIAAEILAQETGRSGLAFAAPTQATS
NALFDRVKAWAQGPAGGFEPHTMFLGHAKNQQQDSFRYLQRADIFDSEADIEGKQSIRPN
TSVARHSWIGGRKRGILSTFVVCTIDQILMMALQSRHVMLRHLGLGSKVVIIDEVHAYDA
YMGVYLKEALYWLGQMNAPVILMSATLPAHVRTSLMESYAEGLEIQDSTDWDFDDGFALE
DVTEPSLDLDYPVIHTLTAEDGYTPRKWQVAAPEEQVTISIRQISDEFTDLDKVLAPLDN
GHGCAAVICNTVGRAQEAYEHLRAKFGNDVMLAHSRFTAKHRAEKEAALVSLLGKDSHRG
DGRPERLIVVGTQVIEQSLDLDFDVMVTDFAPVDLVLQRLGRLHRHERDDSERPKEYLSP
ICYVRGIETFGSEAQVPEFPKGSRLVYEPAILLSSYARLLPYFAGKTLRIPADMSGLVQE
AYKECPEYPEAWDGVYKEAREESDKHQKCASVMAESFLLKRPQNQQTVMADVMNSYLGKK
DGTLSEDQIGEARVRDGDASLEVIAIVVERDGDGRIDRYRTIPSTLQKTQEIDWHNAKDP
NEPANSLAFELLASTIRLPYQYSDSPKNRVRFEAALDELEGERIDSWQKNFMLAGELILP
FELQDSGFYEVTLCDYHLRYSAELGLQSIKLDDE
NT seq 2985 nt   +upstreamnt  +downstreamnt
atgacagtcgaaaatactaaacaccctagtcagcttgctacagcagagacatcatccctc
tgggcaaaaaccggaacggacgaaaccccaagcattggtctttccctacctcaacacatg
acagatgcaggatctgtagccgccgaactatgggataagtggctctcccctggcgctaaa
caacgcattatgaagatgctcaatctcacacaggatgaggccaagtctttcgcctgttgg
gttgccgccacccacgatataggcaaagcgaccccagagtttgcaggacagctagactca
cgcggcagagaagaactccgcgtgtttcgagacaggattgaagaacacaagtttaatttt
cccaatcacctcaccactccacccgcaggaacacgatgccctcattcaacctatagccag
agcatccttattaagctgcttacagaacattacacagacgacgcagagaccgctgggaca
atcgcaagtatcgcgggggctcaccatggtgtacccgccgcatacactccaggaacaccc
ggacaagattttgctatctttgaggccctcaacgacaagtggcatcaagcgtggcatgaa
cttttcgagatgacgctggagcaaactggcgcagatcaggttcttcagaaactcatgtca
ggtaccaaaatccctgttgccgtgcagctttatcttacgggcctggtgattatggcggat
tggatcgcttctaacccaacgtttttccctatgggaacttttgatgttgaggctcagcgc
aaacgcctcaatcaaggctgggatacccttggtcttgagcatccttggggtgcatatact
ggggacgctgccgcttctgacctatacagctcacggtttgggtggaaaaatcccactcta
cgaccaatgcaggaggtagtggctaatgctgcacgtgctatgaagggcggcggcatgatg
tgtattgaggcccccatgggacagggtaaaactgaggctggactcatcgctgccgaaatt
ctagcccaagaaacaggacgcagcgggctcgcctttgccgcccctactcaagcgacgtca
aacgcactgtttgatcgggtcaaagcatgggcgcaagggcctgctggcggttttgaaccg
cacactatgtttttaggccatgcaaaaaaccaacagcaagattctttccgctacctacag
cgagctgatattttcgattcagaagccgacattgaagggaaacagagtatacgccctaat
acttcagtagcacgccacagctggataggcggtcgaaaacgcggcattctttcgaccttc
gtcgtgtgtactatcgaccagattcttatgatggctctacagtcacgccatgtgatgctt
cgccaccttggactgggttctaaagtcgtcatcatcgacgaggtgcacgcctacgatgcc
tatatgggtgtttacctcaaggaggcactctactggctgggtcagatgaacgcacctgtt
attctcatgtcggctactttacctgcgcatgttcgcacctctttgatggagagttacgcg
gaaggtcttgaaattcaggattctactgattgggactttgatgatggtttcgctctagag
gatgttactgagccttctctcgacctagattaccctgttattcatacactcaccgccgag
gatggttataccccgcgtaaatggcaggtagcagcacccgaagagcaggtaacgatctcc
attcgtcagataagcgatgagttcaccgaccttgataaggtactagcacccttagacaat
gggcacggctgtgccgcggttatctgtaatactgtgggccgagcgcaggaagcctacgag
catcttcgggcgaagtttggtaatgatgtcatgctggctcactcccgttttactgctaaa
catcgtgctgaaaaagaagccgctttagtttcgctgcttggcaaggactcccaccgaggc
gatggccgccccgaacgtttaatcgtggtgggaacacaggtcattgaacagtccctggat
cttgattttgatgtcatggtgaccgacttcgccccggtagatttagtgcttcagaggctg
gggcgtctgcaccgccatgagcgtgatgattcagaacggcctaaggaatatctttcaccc
atctgctacgttcgtggtattgagacctttggttctgaagcccaagttccagagtttccc
aaaggttcacgtttggtctacgagcccgctatcctgctcagcagctatgcacggttactc
ccctattttgccggaaaaactctgcgcattccggctgatatgagcgggcttgttcaggag
gcttacaaagaatgtcctgagtacccggaggcttgggatggtgtttacaaagaagcccgt
gaagagtctgataaacatcaaaaatgcgcttcagtaatggcagagtcgttcctcttgaaa
cgcccgcaaaatcaacaaacagtcatggcagacgtgatgaatagttaccttggcaaaaag
gatggaacgctctcagaagatcagattggtgaggcacgtgttcgtgatggcgacgcttcg
cttgaggtgatcgccatcgtagttgagcgtgacggagacggccgcattgaccgttatcgt
acaatccctagtaccctgcagaaaacccaagagattgactggcacaatgcgaaagaccca
aatgagccagccaattcgctagcctttgagctattagcatcgactatacgtctgccctac
cagtactcagactctccaaagaacagggtccgctttgaggcagctcttgatgagctggag
ggtgaacgcatcgactcatggcagaagaactttatgcttgccggtgagcttatcttacct
tttgagctgcaagactccggcttctacgaggtgacgttatgcgactaccacctgcgctac
tctgcggagctgggcctgcaatccataaagctagatgacgaatag

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