Rothia aeria: RA11412_1830
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Entry
RA11412_1830 CDS
T05268
Name
(GenBank) putative helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
raj
Rothia aeria
Brite
KEGG Orthology (KO) [BR:
raj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
raj03019
]
RA11412_1830
Enzymes [BR:
raj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
RA11412_1830
Messenger RNA biogenesis [BR:
raj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RA11412_1830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
MTR4-like_stalk
Helicase_C
CHD5
Motif
Other DBs
NCBI-ProteinID:
BAV88129
UniProt:
A0A2Z5R3Y8
LinkDB
All DBs
Position
complement(1702959..1704623)
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AA seq
554 aa
AA seq
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MLPLFKETVETLFTTGLIKLVFATETLALGINMPARTVILEKLTKYNGETHVDITPGEYT
QLTGRAGRRGIDIEGHAVIAWRPNTTAAHVASLASTRTYPLNSSFRPTYNMVANLIAAYG
AERTRKILESSFAQFQADKSVVGVAARVRKNENALTGYHESMRCRLGDFAEYFALRRDIS
ALEKKAEKTNQRHARTQAHQSIQELLPGDIIHIPPGACADTPWSPPAPNPTPTPASEYSP
KTPTPAPQPPRLRRYYRPRLTHQAPQTAHPQNPQRTPRHRLAHAPSPHRPQTPRETKHRT
ITERPNGLQEQLETLRTKMRNHPCHGCSERETHARWAERWYKLNSDTDGLRRQIARRTNT
IAHVFNRIAQLLTSYGYVNRATDGELTLTSTGQSLRRIYGDKDLLTCLCLEAGFLNTLDP
AAIAATIAALTYQGKRDTIEHLPRYPHPSLRESITTINRELARLNASEEEHKLPQTPACD
FGLVEPIYAWARGAHLAKALENTDLTAGDFVRWAKQVIDSLDQITHINGINADLRARCEK
AIILIRRGVIALDI
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgctgccgctcttcaaagaaaccgtcgaaacgctttttaccaccggcctcattaaactt
gtcttcgccaccgaaaccctcgcccttggcattaacatgcccgcccgcaccgtcatcctc
gaaaaactcaccaaatacaatggtgaaacccacgtagatatcacccccggcgaatacacc
cagctcaccggacgcgcaggccggcgcggcatcgacattgaaggccacgccgtcatcgcc
tggcgccccaacaccaccgcagcgcacgtcgcatccctcgcctccacccgtacctacccg
ctgaactcctcattccggcccacctacaacatggtggcaaacctcatcgcagcctacggg
gcagaacgcacccggaaaatcctcgaatcctccttcgcccaattccaggccgacaaatcc
gtcgtcggcgtcgcagcccgcgtacgcaaaaacgaaaacgccctcaccggataccacgaa
tccatgcgctgccgcctcggcgacttcgccgaatacttcgcattacgccgagacatcagc
gccctcgaaaagaaagcagaaaaaacaaaccagcgccacgcccgcacccaagcgcaccag
agtatccaagaactactgcccggagacatcatccacatcccaccgggcgcctgcgcggat
acgccgtggtcaccacccgcgccgaatccaacaccgacccccgcatcggaatactcaccg
aagacgcccacacccgcaccgcaacccccgcgacttcgaaggtattatcgaccccgtctc
acgcatcaagctccccaaacggctcaccctcaaaacccccaaagaacgccgcgacaccgc
ctcgcgcatgcgccaagccctcatcgaccacaaaccccacgcgaaaccaaacaccgcacc
atcaccgaacgccccaacgggctacaagaacagctagaaaccctacgcaccaaaatgcgc
aaccacccctgccacgggtgttccgagagggaaacccacgcacgctgggccgaacgctgg
tacaagctcaactctgataccgacgggctccgccgccaaatagcccgccgcaccaacacc
atcgcccacgtcttcaaccgcatcgcacaactactgaccagctacgggtacgtcaaccgc
gccaccgacggcgagctcaccctcaccagcaccggccaaagcctacggcgcatctacggc
gacaaagaccttctcacctgcctctgcctcgaagcaggattcctcaacaccctcgacccc
gccgccatcgccgcaaccatcgccgccctcacctaccaaggaaaacgcgacaccatcgaa
cacctgccccgctacccccacccctccctacgcgaaagcatcaccaccataaaccgtgaa
cttgcacggctaaacgcctcagaagaagaacacaaactcccccaaacacccgcctgcgac
ttcgggctcgtagaacccatctacgcctgggcacgcggcgcacacctcgccaaagccctc
gaaaacactgacctcaccgcaggcgacttcgtccgctgggcaaaacaagtcatcgactcc
ctcgaccagatcacccacatcaacggcatcaacgccgatttacgcgcccgctgcgaaaaa
gccatcatcctcatccgccgcggcgtcatcgccctcgacatctaa
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