Rothia aeria: RA11412_2584
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Entry
RA11412_2584 CDS
T05268
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
raj
Rothia aeria
Pathway
raj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
raj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RA11412_2584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
raj03021
]
RA11412_2584
03400 DNA repair and recombination proteins [BR:
raj03400
]
RA11412_2584
Enzymes [BR:
raj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RA11412_2584
Transcription machinery [BR:
raj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RA11412_2584
DNA repair and recombination proteins [BR:
raj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RA11412_2584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Cluap1
Motif
Other DBs
NCBI-ProteinID:
BAV88883
UniProt:
A0A2Z5R2F7
LinkDB
All DBs
Position
complement(2392717..2396619)
Genome browser
AA seq
1300 aa
AA seq
DB search
MSNESSLGLMRIGLATADDIRRWSYGEVKKPETINYRTLKPEKEGLFDERIFGPTKDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDEASRHEDLPNLQAAHDRDKKALETQRDADIAAISREVEQE
LARIEADGGKAAEKRKLRENAERQMASARKRADREIEHLEKVWDRFKNLKVADLEGDEAL
YRSMVDKYGVYFEGAMGAEAIKKRLEDFDLEAEAEALKEVIQNGKGQKKTRALKRLKVVN
AFLTTNNSPLGMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLEL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLEMHQCGLPKQMALELFKPFVMKRLVELSHAQNIKSAKRMVERFR
PQVWDVLEEIITEHPVLLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLVCSAFNADFDGDQ
MAVHLPLSPEAQAEARILMLSSNNILKPSDGRPVAVPSQDMIIGLYHLTTPREGEKNEGH
AFSSIAEALMAMDRHEIELYTKVKVRLSGDEFVAPEGWEAPEGYTSGGPVLLECTVGQIL
FNQTLPKDYPWFSGVADKKGLGKLINDLAEKYPMDIVARTLDNLKNAGFYWASRSGVTVA
VSDIATPSMKPAIMENYEQQAAAIQANFEMGTIGDDERREELIEIWTQATDEVAEAMRDN
LSANGGQNTIYRMVTSGARGNWMQVRQIAGIRGLVSNPKGEIMPRPIKSSYREGLSVLEY
FIATHGARKGLADTALRTANSGYLTRRLVDVSQDVIVREHDCGTRRGLVLPLIDDEANLH
PDVETSIHGRTLAVDVKDAEGSVLAAAGEDVSDVLIEKLFKAGVKDVRVRSVLTCESGIG
VCALCYGRSMASNTLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQGLPRI
QELFEARTPKGVAPISEVAGRVSIEDTERSYKIVVTPDDGSDPQSYTVLRRAASKLQDGD
HVQVGEQLAAGSVDPKEVLRIRGPREAQKHLVSEVQGVYKSQGVEIHDKHVEVIVRQMLR
RVTVIESGDTELLPGELVDNIVFQRANRKALTEGKKPAAGRPEMMGITKASLATESWLSA
ASFQETTRVLTQAAMEAKTDPLLGLKENVIIGKLVPAGTGLARYNDIEVEPSPQARQEQL
NALEAFGYQSVFSPMGDEPYPYANNGFMAVPLDEYGRGME
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgaatcttcgcttggtttgatgcgaattggccttgccaccgccgacgatatt
cgtcgctggtcttacggcgaggttaagaagcccgagaccatcaactaccgtaccctcaag
cccgagaaggagggcctgttcgacgagcgcatttttggccctactaaggactgggaatgc
tactgcggcaagtacaagcgcgtacgttttaagggcatcatttgtgagcgttgcggtgtt
gaggtgacccgctcaaaggtgcgccgtgagcgtatgggccacattgagctggctgccccc
gtcacccacatctggtacttcaagggtgttccctcccgcctggggtacctgttggatctg
gctccgaaggacctggagaaggtcatctacttcgccgcgtacatgattacgagcgtggat
gaggcctcccgccatgaggacctgccgaacctgcaggccgcacatgaccgtgataagaag
gccctggagacccagcgcgacgccgatattgccgctatttcccgcgaggttgagcaggag
ctggcgcgtattgaggctgacggcggtaaggctgctgagaagcgtaagctgcgtgagaac
gctgaacgtcagatggcttcggcccgtaagcgtgctgaccgcgagattgagcacctggag
aaggtgtgggaccgcttcaagaacctgaaggtcgctgaccttgaaggcgatgaggcgctg
taccgctcaatggttgataagtacggcgtgtactttgagggcgcaatgggtgctgaagct
attaagaagcgcctggaggatttcgaccttgaggccgaagccgaggcgctgaaggaggtc
attcagaacggcaagggccagaagaagacccgtgcgctgaagcgtctgaaggttgttaac
gcgtttttgaccaccaataactccccgctgggtatggtgctggatgttgttccggttatc
ccgccggagctgcgtccgatggttcagctcgatggtggccgttttgcaacttccgatctg
aatgacctgtaccgtcgtgtgattaaccgtaataaccgcctcaagcgcctgctggagctt
ggtgcccccgagattatcgtgaataacgagaagcgcatgctgcaggaagctgtggattcg
ctcttcgacaacggtcgtcgcggtcgccccgtgaccggtcccggtaaccgcccgctgaag
tcgctctccgatatgctcaagggtaagcaggggcgtttccgtcagaacctgcttggtaag
cgcgtggactactctggccgttccgtgattgtggttggtccgcagctggaaatgcatcag
tgcggtctgccgaagcagatggcgctggagctgttcaagcccttcgtcatgaagcgcctg
gtggagctttcgcacgcacagaacattaagagtgcaaagcgtatggtggagcgtttccgc
ccgcaggtgtgggatgttctcgaagagatcattaccgagcaccctgtgctgctgaaccgt
gcacctaccctgcaccgtctgggtattcaggcgttcgagccgaagctggttgagggcaag
gctattcagctgcacccgctcgtgtgctccgcgttcaacgctgactttgacggtgaccag
atggcggttcacctgccgctttcgcccgaggctcaggctgaggcgcgcatcctgatgctc
tcctcgaacaatattttgaagccttcagatggtcgccctgtggctgttccgtcgcaggat
atgattattggcctgtaccacctgaccactccccgtgagggtgaaaagaatgagggccac
gcattctcgtcgattgccgaggctctgatggcgatggatcgtcacgagattgagctgtac
accaaggtgaaggtgcgtctctctggtgacgagttcgtggcacctgagggctgggaagcc
cctgagggttacacctcgggcggcccggttctgctggagtgcaccgtcggtcagatcctg
ttcaaccagactctgccgaaggattacccgtggttctccggtgttgctgataagaagggg
ctgggcaagctcattaacgatcttgctgagaagtacccgatggatatcgtggcacgcacc
ctggataacctgaagaacgctggcttctactgggcttcacgttcgggtgtgaccgtggcg
gtttctgatattgccaccccgtcgatgaaacctgcgatcatggagaactatgagcagcag
gccgccgctatccaggcgaactttgagatgggcaccattggcgatgatgagcgccgtgag
gaactgatcgagatttggacccaggcaactgatgaggttgctgaggcgatgcgcgataat
ttgagcgctaatggcggtcagaacaccatttaccgtatggtgacttccggtgcacgtggt
aactggatgcaggttcgtcagattgcgggtatccgtggtctggtgtcgaacccgaagggc
gagattatgccccgcccgattaagtcctcctaccgtgagggcctgtcggtgctggagtac
ttcatcgcaacccacggtgcccgtaagggtcttgccgataccgcgctgcgtaccgctaac
tcgggttacctaacccgtcgtctggtggacgtgtcgcaggatgtgattgtgcgtgagcat
gactgtggtacccgccgcggtctggtgcttccgctcattgatgatgaggcaaacttgcat
ccggatgttgagacctccattcacggacgcacccttgcggtggatgtgaaggacgctgag
ggcagcgtacttgcagccgccggtgaggatgtctcggatgtgctgattgagaagctgttc
aaggctggcgtgaaggatgtgcgcgtgcgttcggtgctcacctgtgagtccggtattggt
gtgtgcgccctgtgctatggccgttcgatggcgtcgaacaccctggtcgatattggcgag
gccgtgggtattattgcggctcagtctattggtgagcccggtacccagctgaccatgcgt
accttccacaccggtggtgtggcatcggctgacgacattacccagggtctgcctcgtatc
caggagctgtttgaggcccgtacccccaagggtgtggcacctatttctgaggttgccggt
cgggtgagcattgaggacacggagcgttcctacaagattgtggtgaccccggatgacggt
tctgatccgcagtcgtacacggtgctgcgccgtgccgcctcgaagcttcaggatggcgat
cacgtgcaggtgggcgagcagcttgccgccggttcggtggatccgaaggaggtgctgcgt
attcgcggcccgcgtgaggcacagaagcacctggtgagcgaagttcagggcgtgtacaag
tctcagggtgtggagattcacgataagcacgttgaggttattgtgcgtcagatgctgcgc
cgcgtgaccgtcattgagtctggcgatactgagctgctgccgggtgagctggtggataat
atcgtcttccagcgcgctaaccgtaaggccctgacggagggtaagaagcccgccgccggt
cgccccgagatgatgggtattaccaaggcgtcgctggcaaccgagtcctggctctctgcc
gcatccttccaggagaccacccgcgtgctcactcaggccgcaatggaggctaagaccgac
ccactgcttggtctgaaggagaacgtcattatcggtaagctggttccggccggtaccggt
ttggctcgctacaacgatattgaggttgagcccagcccgcaggcccgtcaggagcagctt
aacgcgctggaggcgttcggttaccagagcgtctttagcccgatgggcgacgagccgtac
ccgtatgcgaataacgggtttatggcggttcctttggatgagtacggtcgcggtatggag
tag
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integrated database retrieval system
