Rothia aeria: RA11412_2585
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Entry
RA11412_2585 CDS
T05268
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
raj
Rothia aeria
Pathway
raj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
raj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RA11412_2585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
raj03021
]
RA11412_2585
03400 DNA repair and recombination proteins [BR:
raj03400
]
RA11412_2585
Enzymes [BR:
raj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RA11412_2585
Transcription machinery [BR:
raj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RA11412_2585
DNA repair and recombination proteins [BR:
raj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RA11412_2585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
BAV88884
UniProt:
A0A2Z5R2W6
LinkDB
All DBs
Position
complement(2396711..2398690)
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AA seq
659 aa
AA seq
DB search
MVEDGKVTDKVRYLTADDEKSVIIAQANAPLTADRTFAEDEVLCRAGDGSGEAVLVAPTD
VQYMDVSPRQMVSVATALIPYLEHDDANRALMGANMQRQAVPLLESEAPVVGTGMEKYAA
LDSGDSVLAKKAGVVSEVSADLVMVRNDDGTSSSYPIMKFSRSNPGNCYNQRVVVKAGQR
VEERDVIADGPSTDRGELALGKNLLVAYMPWEGLNYEDAIILSQRMVSEDVLTSIHIEEH
EIDARDTKLGPEEITRDIPNVSDEALSALDERGVIHIGAEVEAGDILVGKVTPKGETDLT
PEERLLRAIFGEKSREVRDTSLKVPHGESGTVIGVRIFDRESDDEDDLPPGVNQLVRVYV
AQKRKITDGDKLAGRHGNKGVISKILPIEDMPFLEDGTPVDVILNPLGVPGRMNIGQVLE
VHTGWLAKQGWKIEGDPAWLKNMPNFPKESGPTRLATPVFDGAHEDELFDLMDHANPNRD
GDRLINRSGKARLIDGRSGEPFPDPISVGYQYILKLHHLVDDKIHARSTGPYSMITQQPL
GGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTVKSDDVAGRVKVYEAIVKGENIPEPGI
PESFKVLIKEMQSLCLNVEVLSTDGKTIEMSDSEEEGFRAAEDMGVSLTHAEPSSVDEA
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
gtggttgaagacggcaaggtcactgacaaggtgcgttatttgactgctgatgacgagaag
agcgttattattgcgcaggcaaacgccccgctgaccgctgaccgcaccttcgctgaggac
gaggttctctgccgtgcaggcgatggttccggtgaggccgtgctggtagcaccgactgac
gtgcagtacatggacgtttccccgcgccagatggtgtcggtggcaaccgctctgattcct
taccttgagcacgacgacgcgaaccgcgcgttgatgggcgcgaacatgcagcgtcaggct
gtgccgctgctggagtctgaggctcccgtggtgggtaccggtatggagaagtacgctgcg
cttgactccggtgactccgtgctggcgaagaaagctggcgtggtctcggaggtctcggct
gacctggtgatggttcgtaatgatgacggcaccagcagctcgtacccgatcatgaagttc
tcccgctcgaacccgggtaactgctacaaccagcgtgttgtggttaaggccggtcagcgt
gtggaagagcgtgacgttattgcggacggcccctccaccgaccgtggtgagcttgctctg
ggcaagaacctgctcgtggcatacatgccgtgggagggcctgaactatgaggatgcgatt
atcctctcccagcgcatggtttccgaggacgtgctgacctccatccacattgaggagcac
gagatcgatgcccgcgacaccaagctcgggcctgaggaaatcacccgcgatatccccaac
gtctcagatgaggccctgtccgcgctggatgagcgcggcgtgatccacattggtgccgaa
gttgaggctggcgacattttggtcggtaaggtcacccccaagggtgagactgacctgacc
ccggaggagcgcctgctgcgcgcgatcttcggtgagaagtcccgcgaggtacgcgatacc
tccctgaaggttcctcacggcgaatccggtactgtgatcggtgttcgtatcttcgaccgt
gaaagcgacgacgaggacgatctgcccccgggcgtgaaccagctggtgcgcgtgtacgtg
gcgcagaagcgtaagatcaccgatggtgacaagctcgcgggccgccacggcaacaagggt
gttatttccaagatcctgccgattgaggatatgcccttcctggaagacggtactcccgtg
gatgtcatcctgaacccgctgggtgtgcccggccgtatgaacattgggcaggtgcttgag
gttcacaccggctggctggccaagcagggctggaagattgagggcgacccggcctggctg
aagaatatgccgaacttcccgaaggagtccggccccacccgcctggcaacccccgtgttt
gacggcgcccatgaggacgagctgtttgacctcatggaccacgcaaacccgaaccgtgat
ggtgaccgcctgattaaccgctccggtaaggcccgtctgattgatggtcgttcaggtgag
ccgttccctgacccgatctcggtggggtaccagtacatcctgaagctgcaccacttggtg
gacgataagattcacgcccgctccaccggcccgtactcgatgattacgcagcagccgctg
ggtggtaaggcccagttcggtggtcagcgtttcggtgagatggaagtgtgggcgctggaa
gcgtacggcgccgcctacaccctgcaggaaatcttgaccgtcaagtctgacgatgtggct
ggtcgtgtgaaggtatacgaggcaatcgttaagggtgagaacatccccgaaccgggcatc
cccgaatccttcaaggttcttattaaggaaatgcagtccctgtgtctgaacgttgaggtg
ctctctaccgacgggaagaccattgagatgagcgactcggaggaagaaggcttccgggca
gcagaagatatgggtgtgagcctcacccacgcagagcccagctctgtggacgaggcataa
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