Rickettsia akari: A1C_06050
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Entry
A1C_06050 CDS
T00601
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rak
Rickettsia akari
Pathway
rak03030
DNA replication
rak03430
Mismatch repair
rak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A1C_06050 (dnaE)
03430 Mismatch repair
A1C_06050 (dnaE)
03440 Homologous recombination
A1C_06050 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rak03032
]
A1C_06050 (dnaE)
03400 DNA repair and recombination proteins [BR:
rak03400
]
A1C_06050 (dnaE)
Enzymes [BR:
rak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A1C_06050 (dnaE)
DNA replication proteins [BR:
rak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A1C_06050 (dnaE)
DNA repair and recombination proteins [BR:
rak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A1C_06050 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABV75443
UniProt:
A8GPW8
LinkDB
All DBs
Position
complement(1075171..1078728)
Genome browser
AA seq
1185 aa
AA seq
DB search
MQPEFIHLRTQSSYSFLESALTLEKIVELASSNKMPAICLADRGNLFGSLEFALYAVKKG
LQPIHGVILNIKYDVDIFAQILLIAKDETGYKNLLKLSSLTFTKNDRKICDHITFEDLIK
YQEGLIALCCYTDGIVGKCLLAREQEQAMLFARTLQEILGDRFYFEIMRHDLPEEQFIED
SYIKIASELSIPLVATNKVLFSEKSMHDAHDVLLCISAGVTKEYPDRKTVSENCYFRSPH
EMREIFSDLPNAIQNTVNLRERCYFAAHANPPMLPNFATKDISETDLIRKDAKEGLLARL
ATKFKSEHISLENQEELKTEYFARLNYELDIICNMNFAGYFLIVSDFIKWSKKKGILVGP
GRGSGAGSVVAWSLLITDLDPIKFGLLFERFLNPERISMPDFDIDFCQERREEVINYVRS
KYGHNRVGQIITFGKMQAKAVIKDVARVLSLPYKFADYLTELVPFSAVNPVTLEQAMREV
PELANAAKGNGLYNLEGEAELIKLVLDTSLILEGLHRHVSTHAAGIVIACTDLVDIVPVY
KDANSDMLVVGYSMKYSEIAGLIKFDFLGLQTLTVITDCKKLLKEQGIEVDFNNMTFDDN
KTYQMLCKGKGVGVFQFESIGMKDALRRLKPDSIHDLIALGALYRPGPMENIPTYIACKH
KLKQPDYLHELLKPILEETYGVVIYQEQVQRIAQILAGYTLGAADLLRRAMGKKIKKEME
EHEEIFVKGAIANNISESQAKSIFATVAKFAGYGFNKAHAAAYGVISYQTAYLKANYSAE
FLVACLNLELNNHDKINLFLQEAKDSGIKIIAPNINSSEGYFTTCHFGSALCHPRVGVDP
EKTSEMKMDSRFCENNIESTGYDKEERAIIFALGAIKGVTPSFGKLVTDERKARGAFKSI
TDFIERLPPKSINSKLLENLIKSGCFDELHDNRLQLFLSISKLLAYSTSYHEEQESNQFS
LIKVSSLSPTILVSSDYADKNTLAFYEFESMGLFISNHPLTEYQEIFSRLNILNTAYLYN
NLPEGTNRVNLAGVIQKKDSRMSARGRFVTLVLSDPENIFELSVFSEEVLKDYVHLLDVK
SLVVVNCDVVKDEGGIKLTAKSFSSIEDAINNKQFELQLYPKNYEELEQIVTLLSARTNN
GDHSNAKATIYLQSEDVKNFVAKITLSEQFFLQVQDFEILKGYSK
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgaatttattcatttaagaactcaaagctcttattcttttctagaaagtgca
ttaacgcttgagaagatagtagaacttgcttcatcgaataaaatgcctgctatttgtttg
gcagataggggcaatttattcggctcgttagaatttgcattatatgcagtaaaaaaagga
ctgcagccgatacatggagttattctaaatataaaatatgatgtagatatttttgctcaa
attttgcttatagctaaagatgaaaccggttataaaaatttactcaaactatcaagcctt
acttttactaaaaatgatcgtaagatatgcgatcatattacttttgaagatttaatcaaa
tatcaagaagggctaatagcattatgttgttatactgacggtattgtcggaaaatgctta
ctagctcgtgagcaagaacaagcgatgttgtttgcccgcactctacaggaaatcttagga
gatcgtttttattttgagattatgaggcacgatctgccggaagaacagtttattgaggat
agttatattaagatagcttcggaattatctattccgcttgttgctactaataaagttctg
tttagcgaaaaaagcatgcatgatgcacatgatgtgctgttatgtatatcagctggtgtg
actaaagaatatcctgatcgtaaaacagttagtgaaaattgttattttaggtcaccgcat
gagatgagagagattttttctgatctacctaatgccatacaaaatactgtgaatttaaga
gagcgttgttattttgcagcacatgcaaacccgccgatgctgcctaattttgctaccaaa
gatattagtgaaacggatttaattagaaaagatgcaaaagaagggttgcttgcaaggctt
gctacaaagtttaaatctgaacatatttcattagagaatcaagaagagttgaaaaccgaa
tattttgcgcgtcttaattatgagctggatattatctgtaatatgaattttgccggttat
tttttgattgtatccgattttattaaatggagtaaaaaaaaggggattttagtcggaccg
ggtagaggttcaggagcaggctcggttgtcgcttggagcttgcttattactgatctcgat
ccgattaaattcggcttattatttgaaagatttttaaatcccgaacgtatttcgatgcct
gacttcgatattgatttttgtcaagaaagacgtgaggaagtgattaattacgtacgttct
aaatacggccataatcgagtagggcagattataacttttggtaaaatgcaggcaaaggct
gtaattaaggatgttgctcgtgtgctgagtttaccttataaattcgctgattatctaacg
gagcttgtaccttttagtgcggttaatccagttacgcttgaacaggcgatgcgtgaagtt
ccggagcttgcaaatgccgctaaaggtaatgggctgtataatttggagggtgaagcggag
ttaattaagctagtgcttgatacttcgttaattcttgaggggttacataggcatgtctca
actcatgctgcaggaatcgtaatagcatgtactgatttagtcgatatagtaccggtatat
aaagatgctaattctgatatgctggtagtcggttattctatgaaatattccgaaattgcc
ggtttaattaaatttgattttttaggactgcaaaccctaacggttattaccgattgtaag
aaactacttaaagagcaaggaatagaagtagattttaacaatatgacctttgatgataat
aagacttatcaaatgttgtgtaaaggtaaaggagtcggcgttttccaatttgaaagtatt
gggatgaaagatgcacttagacgccttaaacctgattctatacacgatttgatagctctt
ggggctttatatcgtccgggtcctatggaaaatatccctacctatatagcttgtaagcat
aaattaaaacagcctgattatttacatgagctattaaagccaatcttagaagaaacttac
ggagtggtgatatatcaggagcaggtacaaagaattgctcagattcttgccggttatacc
ctaggagctgctgatttgcttcgtagagcaatgggtaagaagataaagaaagaaatggag
gagcatgaagaaatcttcgttaaaggagcgattgctaataatatttcggaatctcaagct
aaatccatttttgcaactgtggctaaatttgccggttacggttttaataaagcccatgct
gcggcttatggtgttatttcataccaaactgcttatcttaaagctaattattctgctgag
tttttagtagcatgtttaaaccttgaattaaataatcatgataaaattaatttattttta
caagaagcaaaagatagcggtataaaaattattgctcctaatattaatagttctgaaggg
tattttacaacttgtcatttcggcagtgctctatgtcatcctcgtgtaggcgtggatcca
gaaaaaactagtgaaatgaaaatggattcccgcttttgcgagaataacatagaaagtacc
ggatatgacaaagaagaaagagcaataatcttcgctttaggtgctattaagggagtgacg
ccaagtttcggtaagttagtaacagatgagcgaaaggcaagaggagcctttaaatcaatt
actgattttattgaacgattaccgccaaagtctattaacagtaaattattggaaaattta
attaaatctggctgctttgatgagctacatgataatcgattgcaattatttttaagtatt
tcaaagttgcttgcttattcaacttcatatcacgaagagcaggaatctaatcaatttagc
ttaattaaagtttctagtttaagtccaactattttagtatcaagtgattatgccgataaa
aatactttagccttttatgaatttgagtctatgggtttatttatctctaatcatcctctt
acggaatatcaagaaatatttagtcgtttaaatattttaaatactgcgtatttgtataat
aatttacctgaaggtactaaccgagtaaatcttgctggtgtgatacaaaaaaaggattct
cgtatgtcggcaagaggcaggttcgtgacgcttgtgctttccgatcctgagaatatcttt
gaacttagtgtttttagtgaagaagtcttaaaagattatgtacatttactcgatgttaaa
agtttggtagtggttaattgtgatgtagttaaagatgaaggaggaataaaactaacggca
aaaagcttttcatcaatcgaggatgcaattaataataaacaatttgagttacagctttac
cccaagaattatgaagaattagagcagatagtaaccttgctttcagctcgcactaataac
ggagatcatagtaatgctaaagcgacaatctatttacaaagtgaagatgtaaagaatttt
gtagcaaaaattacattatctgaacagttttttctccaagtgcaagattttgagatttta
aaaggatatagtaaatag
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