Ruminococcus albus: Rumal_0008
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Entry
Rumal_0008 CDS
T01387
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ral
Ruminococcus albus
Brite
KEGG Orthology (KO) [BR:
ral00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ral03032
]
Rumal_0008
03400 DNA repair and recombination proteins [BR:
ral03400
]
Rumal_0008
Enzymes [BR:
ral01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Rumal_0008
DNA replication proteins [BR:
ral03032
]
Prokaryotic type
DNA Topoisomerases
Rumal_0008
DNA repair and recombination proteins [BR:
ral03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Rumal_0008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
ADU20572
UniProt:
E6UB31
LinkDB
All DBs
Position
5393..7381
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AA seq
662 aa
AA seq
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MDNDNIKEVEIVDTESISQIDKSNNYDENQIEVLEGLEPVRVRPGMYIGSTGPKGLHHLV
YEIVDNAIDEALAGYCTEIIVDILPGDVIRVVDNGRGIPTGIHPKEGISAATVVYTVLHA
GGKFGGGGGYKVAGGLHGVGASVVNALSEYLELTVYDGKNVHFQRFDRGHYSEPLKIIGE
TDKTGTEVKFKPDPEIFQETTTFDYEILLKRLREQAFLNAGIKIVFSDLRNAEKPISEVL
HYEGGIRQFVEHIHKTRGVEPLSEDVIYINGVEDDMFAEIALQYNDTYNEIILSFANNIH
TPDGGSHEMAFKSALTKILNDYGKAHNLIKDNDDALMGEDCREGLTAIVSVKLTNCEFEG
QTKGRLGNPEVRPFVDKMLKEKLRNYLEENPAVAKAIFDKSIQAQKAREAAKRARELTRR
KSVLESASLPGKLADCSERDMSMTEIYIVEGDSAGGSAKEGRDRRYQAILPLWGKMLNVE
KARIDKVYGNEKLMPVVTALGTSIGDDFDISKLRYGKVIIMADADVDGSHIRTLLLTFFF
RFMRPLIEEEHVFIAQPPLFKVERNKKVRYAFTDEERDKYIDELSDGGKLKVAVQRYKGL
GEMDPEQLWETTMDPERRTMIKVTMEDAVKADEIFTILMGDKVGPRKEFIEKNAEYVKDL
DV
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
ttggataacgataatatcaaggaagtcgagatcgtagataccgagtctatctcgcagatc
gacaaaagcaacaactacgacgaaaatcagatagaggtactggaaggtcttgaacctgtc
cgtgtaagacccggtatgtatatcggttccacaggaccaaagggtctgcatcaccttgtt
tacgagatagttgacaacgctatcgacgaagcacttgcaggctattgtaccgagataata
gttgatatccttcccggggatgttatcagggtagttgataacggacgaggcatacccaca
ggcatccacccgaaagagggcatttctgcggctaccgttgtttatactgttctccatgca
ggcggtaagttcggcggaggcggaggatataaggtagcaggcggtcttcacggcgttggt
gcgtcggttgttaacgctctgtccgaatatctcgaactcacagtatatgacggcaagaac
gttcatttccagcgttttgacagaggtcattacagcgagcccctgaagatcataggcgag
accgataaaacaggcaccgaagtaaaattcaagcccgatcccgagatattccaggaaact
actaccttcgattatgagatactgctgaaaagactgcgtgagcaggctttcctgaatgca
ggcataaagatagtcttttcagacctgagaaatgccgaaaagcctataagcgaagttctt
cactatgagggcggtatccgtcagttcgttgaacatatccataagaccagaggtgttgag
cccctctccgaggacgttatatatatcaacggcgttgaggatgatatgttcgctgagata
gcactgcagtataacgatacctataacgagataatactctcgtttgccaataatatccat
acccccgacggcggttcacatgagatggcattcaagtcagcactgactaagatcttaaac
gattacggaaaggcgcataatctcatcaaggataatgacgacgctcttatgggcgaggat
tgccgtgagggtctgacagctatagtttcagtcaagctgacaaactgtgagtttgaaggt
cagacaaagggaagactcggtaatcccgaggtaagacccttcgtcgataagatgctgaaa
gaaaagctacgcaattatctggaggaaaatcccgcagttgcaaaggctatatttgataag
tcaatacaggcacagaaggcaagagaagctgcaaagcgtgcaagagaactgacaagaaga
aagtccgttcttgaatccgcttcactgcccggtaagctggctgactgttccgagagagat
atgtccatgaccgagatatatatcgtcgagggagattctgcgggcggttccgcaaaagag
ggtcgtgacagacgctatcaggctatactccccctctggggcaagatgctcaacgtcgaa
aaagcccgtatcgacaaggtatacggcaacgaaaagctcatgcccgtagttacagcactc
ggtacctctatcggtgatgattttgatatcagcaagctgagatacggcaaagtcataatc
atggcggatgccgatgtggacggttctcatatccgtacacttctgctgactttcttcttc
cgtttcatgcgtccccttatcgaggaggaacacgtattcatcgctcagcctccccttttc
aaggtggaaagaaacaagaaagtaagatatgctttcaccgatgaagaaagagataagtat
attgacgaattatccgacggcggcaaactgaaagtcgctgtccagagatataagggtctt
ggtgagatggatcccgaacagctttgggagaccactatggatccagagcgcagaacgatg
ataaaggtaactatggaggacgctgtcaaagcggacgagatattcaccatacttatgggc
gacaaagtcggtccccgtaaggaattcatcgagaagaacgctgagtatgtcaaggatctt
gacgtataa
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