Ruminococcus albus: Rumal_0287
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Entry
Rumal_0287 CDS
T01387
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ral
Ruminococcus albus
Pathway
ral03030
DNA replication
ral03410
Base excision repair
ral03420
Nucleotide excision repair
ral03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ral00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rumal_0287
03410 Base excision repair
Rumal_0287
03420 Nucleotide excision repair
Rumal_0287
03440 Homologous recombination
Rumal_0287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ral03032
]
Rumal_0287
03400 DNA repair and recombination proteins [BR:
ral03400
]
Rumal_0287
Enzymes [BR:
ral01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rumal_0287
DNA replication proteins [BR:
ral03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Rumal_0287
DNA repair and recombination proteins [BR:
ral03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Rumal_0287
NER (nucleotide excision repair)
GGR (global genome repair) factors
Rumal_0287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ADU20844
UniProt:
E6UDL6
LinkDB
All DBs
Position
292925..295495
Genome browser
AA seq
856 aa
AA seq
DB search
MKLLCIDGNSIMNRAFYGIRILTNSKGICTNAITGFMNIYMKEIGEVHPDCVAVAFDLKA
PTFRHKANSSYKANRKGMPDELAQQMPLIKKLLGLLGIKTVECEGYEADDILGTLSKAAA
DSGNECYILTGDRDSFQLVSENVTVRLAGTKETKIYTPERIMEEYGVTPRQMIEVKALMG
DTSDNISGVKGIGEKTALSLIQQAGTVENLYSDLDKFTITNGNRAKLEAGHQDAIDSHFL
AEICLEAPVEKDTAAYKLTAPDAAEAKAFLTELEMLRLMERLKLTGADSKSADAGEETKI
KLKDLPKYETGLPLNDDAIAQMTEGKKSAFIFDGNKLQVFFEDKVYSIAFGDWDFDGIAL
RYFESGCEKTAFEGKKAHRFAFDNGTRLNGLTFCCDLAGYLLNSQAGEYTAENLCLTYKV
TYRSDMGDFADVCSLLPLAENLKLQLEQTEMLKLFNEVEMPLCEVLASMEHYGVRADTNG
IREFGKWLKKDIEALTKQIYDLAGGEFNIASPKQLGEVLYEKLGLPAKKKTKSGYSTNAE
VLEELADKHPIVRLVLEYRTLTKLSSTYVDGLLKEVESDGRVHSVFKQTETRTGRISSTE
PNMQNIPVRKEIGRNMRKFFVAGEGCTLLDADYSQIELRVLAAVCGDENMRKTFEEGTDI
HAMTASQVFGIPADMVLPEMRSAAKAVNFGIIYGIGAFSLSKDIGVSVAEAKQYIKNYLD
NFPKVSQFMDKTVEDGIKNGYVTTIFGRRRYIPELSATNKVMQAFGKRAAMNAPIQGAAA
DIIKIAMVKVYQRLKEEKLDARLILQVHDELIIEVTPEDKDKASAVLKEEMENAVKLAVP
MEVSVGEGESWYLAKG
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgctttgtatagacggcaacagcataatgaaccgtgctttttacggcatacgc
atactcaccaattccaaggggatatgcaccaatgccataacagggttcatgaatatatat
atgaaagagataggtgaagtgcaccccgactgtgtggctgtagccttcgatcttaaagca
ccgactttcaggcataaggcgaattcttcatacaaggcaaaccgcaagggtatgcccgat
gaactcgctcagcagatgccccttataaaaaagcttctcggacttctcggcataaagact
gtggagtgtgagggctacgaagccgatgatatcctcggcacactctcaaaagccgctgcc
gatagcggaaatgagtgctatatcctcacaggtgaccgcgacagtttccagcttgtcagt
gaaaatgtcacggtacgacttgcgggtactaaagagaccaagatatacactcccgaaagg
ataatggaggaatatggtgtaacaccccgtcagatgatagaagtcaaagcgctcatgggt
gatacctcggataatatctcgggtgttaagggcataggtgaaaagaccgccctgagcctt
atacagcaggcaggtactgttgaaaacctctattccgaccttgataaattcacgataact
aatggcaaccgcgcaaagcttgaagcgggtcatcaggacgcgatagacagtcatttcctt
gcagagatatgccttgaagcccccgttgaaaaggacactgcggcttacaaattaactgct
cccgatgcagccgaagctaaagctttcctcaccgagcttgaaatgctcagactgatggaa
aggctgaaactcacaggtgcagacagcaagtcagccgatgcgggtgaggagaccaaaata
aagctcaaagacctgcccaagtacgaaacaggtcttcccttaaatgatgatgccatcgca
cagatgaccgagggcaaaaaatcagcctttatctttgacggtaataaattgcaggtcttc
tttgaggataaggtgtattcaatagctttcggtgactgggatttcgacggcatcgccctg
agatattttgagagcggctgtgaaaagaccgcatttgagggcaagaaagcccacagattc
gcatttgataacggtacccgccttaacggtctgacattctgctgtgaccttgcaggatat
ctgctgaattctcaggcaggggagtacacagccgaaaatctctgcctgacctataaggtc
acttaccgctcggatatgggcgattttgcagatgtctgctctctgctaccgcttgcagaa
aaccttaaattacagcttgaacagaccgagatgctcaaactcttcaatgaggtggaaatg
cccctctgtgaagtcctcgcatctatggaacattacggtgtacgtgcagatacaaacggt
atacgtgagttcggcaaatggctgaaaaaggatatcgaagccctcaccaagcagatatac
gaccttgcaggcggcgaattcaatatcgcatcaccgaaacagctgggcgaagtcctctat
gaaaaactgggacttcccgcaaagaagaaaaccaagtcgggttattccaccaacgccgaa
gttcttgaagaacttgcagacaagcaccccattgtacgccttgtgcttgaataccgcacc
cttacaaaactcagctccacctatgttgacggtctgctgaaagaagtagaatccgacggc
agggtacacagcgtattcaaacagaccgagacccgcacgggacgtataagctccaccgaa
cccaatatgcagaatatccccgtgcgcaaggagataggacgcaatatgcgtaagttcttc
gttgcaggtgaaggctgtactcttcttgatgccgattacagccagatagaactccgtgtt
ctcgcggcagtatgcggcgacgagaatatgagaaaaacttttgaagagggcacggatatc
catgccatgacagcttcacaggtattcgggatacccgccgatatggtgctccccgagatg
agatcagccgcaaaggcagtaaacttcggcatcatctacggtatcggagcattttcacta
tccaaggatataggtgtcagcgtggcagaagccaagcagtatatcaagaactatctcgat
aacttcccgaaggtatcacagttcatggataagacagtagaggacggcataaagaacgga
tatgtcaccaccatattcggcagaagacgctatatccctgagctttccgcgaccaataaa
gtcatgcaggcattcggaaagcgtgccgctatgaatgccccgatacagggcgcggcggca
gatatcatcaagatagccatggtaaaggtctaccaaaggctgaaagaagaaaagcttgat
gcaaggctgatacttcaggtacacgatgaacttataatcgaagtcacccccgaggacaag
gacaaagcttccgcagttctcaaagaggagatggagaatgcagtcaagcttgcagtacct
atggaggtctccgtaggcgagggcgaaagctggtatcttgcaaagggctga
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