Ruminococcus albus: Rumal_0924
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Entry
Rumal_0924 CDS
T01387
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ral
Ruminococcus albus
Brite
KEGG Orthology (KO) [BR:
ral00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ral03016
]
Rumal_0924
Enzymes [BR:
ral01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Rumal_0924
Transfer RNA biogenesis [BR:
ral03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Rumal_0924
Prokaryotic type
Rumal_0924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
YhjD
DUF2344
TGBp3
Motif
Other DBs
NCBI-ProteinID:
ADU21450
UniProt:
E6UBA0
LinkDB
All DBs
Position
1058202..1058939
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AA seq
245 aa
AA seq
DB search
MTLAYDGSNYHGWQRQSNALAVQEVVEDAIFKLTGENVVVQGCSRTDAGVHAREYVLSFG
LELPINCRGIQLGLNSWLPDDISVIGCEEADEGFHARYMCKGKEYEYIVHNSRIKDPFMR
NTAFRNTYPIDEVLLDRAAKYFVGEHDFKAFCSTACDKEITVRKIYRFDVRREGDKVIFT
VAGNGFLYNMVRIMVGTLLFINEGKIAADAIPRILDSKDRKKAGKTVPPQGLYLNKVYYD
EVSVD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgacgctggcttatgacggcagcaattatcacggctggcaaagacagtcaaatgcactg
gctgtgcaggaggtagtggaagatgctatctttaagctgacaggcgaaaatgtggtggtg
cagggctgttcgcgtaccgatgcgggagtccatgcaagggaatatgtcctttcttttgga
cttgaactgcccataaactgccgtggcatacagctggggctgaattcatggctgcccgat
gatataagcgtcatagggtgcgaggaagccgatgagggctttcacgcgagatatatgtgc
aagggcaaggagtatgagtatatcgtacacaacagcaggataaaagaccctttcatgcga
aatactgctttcaggaacacttatcccatagatgaggtgcttctggacagggcggcaaag
tattttgtcggtgagcatgatttcaaggcattctgttcaactgcctgcgacaaagagata
acggtaaggaagatatatcgcttcgatgtcagacgtgagggcgacaaggtgatcttcacg
gtggcaggaaacggatttttatacaatatggtcaggataatggtggggaccctgcttttc
ataaacgagggcaagatagccgctgatgctataccccgtatactggattcaaaggacagg
aagaaagcaggcaagacagtaccgccacagggattatacctgaacaaagtttattatgat
gaggtatcggtagattga
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