Ruminococcus albus: Rumal_2185
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Entry
Rumal_2185 CDS
T01387
Name
(GenBank) glycoside hydrolase family 4
KO
K22933
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
ral
Ruminococcus albus
Pathway
ral00040
Pentose and glucuronate interconversions
ral01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ral00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Rumal_2185
Enzymes [BR:
ral01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
Rumal_2185
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_4
Glyco_hydro_4C
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
ADU22671
UniProt:
E6UC49
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All DBs
Position
complement(2448155..2449561)
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AA seq
468 aa
AA seq
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MKTIKIAYIGGGSKMWARVFMNDLALTEGLGGEIALYDIDFEAAELNRRIGEKINACNDT
ITKWDYKVYPDIGSALDGADFVICSILPGTFDEMEYDVHLPEKYGIYQSVGDTVGPGGVL
RAMRTVPIYEGFAKAIKKYCPDAWVINLTNPMTACTKTLYDVFPEIKAFGCCHEVFHAQE
FLCCVVSDMLVIPRPSRQEINIDACGVNHFTWITEANYKGTDLFSLLPAFIDKYYESGYC
EREGVAPDGFKNDPFLYGNKVKMDLFRRFGILAAAGDRHLVEFMNSAWYIKDKASVDKWL
YHLTEVSYRKKDMAEKIARSHRLADGTESISLNRSDEEVVELMKALLGLIPPKVSNANVP
NVGQMPQMPLGSVVETNCVFSHNSLKPITSRKLPEDVSALVLRNALNIENTYYGIKNRDL
NRLFEAFIAQPLCSALSITEARELFSSMVDGTRYYLEPWFSDKELTLC
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacaataaaaatagcttatatcggcggcggttctaaaatgtgggcaagggtgttt
atgaatgatcttgctctcactgaaggtcttggtggagagatagctctttatgatattgac
tttgaagcagctgaacttaacaggcgtataggtgaaaagataaatgcctgcaatgataca
ataacgaagtgggattataaggtatatcctgatatcggcagtgcccttgacggcgctgac
tttgtgatatgctccatacttccgggtacatttgatgagatggagtatgatgttcatctc
cctgaaaaatatggaatatatcaatcggtcggtgatactgtcggaccgggcggtgttctt
cgtgctatgcgtacagtcccgatatatgaaggcttcgctaaggcgatcaagaaatattgt
ccggatgcatgggtgattaatctgactaatcccatgacagcctgcacaaagacactttac
gatgttttcccggagatcaaagcctttggctgctgtcacgaggtattccatgcacaggag
ttcctttgctgtgtagtaagtgatatgctggttattccaagaccttccagacaggagatc
aatattgatgcctgcggtgtaaatcattttacctggatcaccgaagctaactataaaggc
acagatcttttcagtctgctccccgcattcatagataaatactacgagagcggttactgc
gagcgtgagggagtagcacctgatggttttaagaatgatccgtttttgtacggcaacaaa
gtcaagatggatctgttcaggcgctttggtatactggcagctgcaggtgacaggcacctt
gttgaattcatgaacagtgcctggtacataaaggataaggcttctgtggacaaatggctt
tatcatcttactgaggtaagctatcgtaaaaaggatatggctgaaaagatagctcgttca
catcgtcttgctgatggtacggaaagcatcagtctgaaccgcagtgatgaagaagtagta
gagcttatgaaggcactgcttggtttgataccgcccaaggtatcaaatgcaaatgtcccg
aatgttggacagatgccgcaaatgcctttgggttcagtcgttgagacaaactgtgtattc
tcgcataacagcctgaagcccataacatcaagaaagcttcccgaggatgtaagcgcgctt
gtccttcgcaacgcattgaatatcgagaatacttactatggtataaagaaccgtgatctg
aacagattgtttgaggctttcatagctcagccgctttgcagtgctctttctataactgaa
gcacgtgaactgttcagcagcatggttgacggtacaaggtattatcttgaaccatggttt
tctgataaagagctgacactatgctag
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