Ruminococcus albus: Rumal_2539
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Entry
Rumal_2539 CDS
T01387
Name
(GenBank) Ricin B lectin
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ral
Ruminococcus albus
Brite
KEGG Orthology (KO) [BR:
ral00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Rumal_2539
Enzymes [BR:
ral01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
Rumal_2539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RicinB_lectin_2
Ricin_B_lectin
RGI_lyase
FG-GAP
FG-GAP_3
Beta-tre_PLH30
DUF7486
Trypan_PARP
Motif
Other DBs
NCBI-ProteinID:
ADU23014
UniProt:
E6UF15
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All DBs
Position
2852086..2855238
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AA seq
1050 aa
AA seq
DB search
MSGMTKKIASLAASVLLAATSTVGAVSSITANAAYGVGGNGTAIMEYLDRGIYAVKSGNG
MFVSWRYNANDADNAEFRLYRDNKLIYTSKSGDATSYQDNGGSTNSKYRVDCVSGGKVID
SQNCKFTSGNNYFDIKLNRPGSQYSPNDCVVGDVNGDGQYEIFLKWDPSNQKDNSQEGKT
DNVYIDCYTLEGKQLWRVDLGKNIRAGQHYTQMCVADFDCDGKAELITKTADGTKDGKGK
VIGDGSKDYRNGKGYILDGPEYMTLFDGQTGAALDTIDFPVPRGKVSDWGDNYGNRVDRM
NSGIAYLDGVHPSAIYGRGYYTRLTWSAVDVSNKKLKVRWKYDSTFNKSTKGWGCGNHNV
MVADCDNDGKQEIFTGANCIDDNGKLLWSTGDLHGDAMHVGDLIPDRAGLEVWECHEDKP
YGETCYDAKTGQKIFHINNSKDTGRCVADNVWAGSKGAEFWGAADGNVYNTTGKKIGGTK
PAQNFLIYWDGDLEREILDGNKISKMTGADKIDRIFTANGCGSNNSSKNNPCMTVDLFGD
WREELILRTDDNTKLRVWCTTNTTKVRLTTLMHDMQYRAQNCCQQSAYNQPPHVSYYLGS
DAPIPARPKIKLNNSYNPGPNPNPDPDPDPTPDPVIPETDIIDGQVYTFKNVNSGLYLSV
EGAAAANGANVEQGNANGKQVQFKAVSAGDGYFYLVSQLGDGKTYAIDVSGRHTEDETNI
EIYEFNKGDNQKFRIDKNSDGTYSILTKITNGNSALDVNGKSTNAGANVQQYTYKGSTNQ
KWYAEAVKQNNNDNPQNPPVVQTSDITDGQIYTIKNLNSGLYLSVKGSNAGNGVNVEQAA
ANGAQNKFKAVAAGDGYFYLVSQLGDGNSYALDVNGRKTEDGTNIEIYTFNKGENQKFKF
VKNSDGTYSILTKITDGKSALDVNGQSRDAGANIQQYTYNGGNNQKWYVETSSTSGNITT
GSYPVVTSIEYNALYHQFKMNWTSVKNAEKYGIAVYLAGKWRVQTYTNDTTFTSPKLKAG
DRYRVLVAARVGGQWDLSDLKERSVIISIK
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtatgaccaaaaaaattgcctcacttgcagcgtcggtattgcttgcagcaaca
tcgacagtaggtgcagtgagcagcatcacagccaacgctgcttacggtgtgggcggcaac
ggaactgcgatcatggaataccttgacagaggtatttatgccgttaaaagcggtaacggt
atgttcgtaagctggcgttacaatgctaacgatgcagacaatgccgagttcagactttac
cgcgacaacaagctgatctacacaagtaaatcaggcgatgcaacttcctatcaggacaac
ggcggcagcacaaattcaaagtaccgcgttgactgcgtatcaggcggaaaggtaatagat
tcgcagaactgcaaattcacatccggcaacaattatttcgacatcaagcttaacagaccc
ggaagccagtattcacccaatgactgtgttgtaggcgacgttaacggcgacggacagtac
gagatattcctgaaatgggatccctctaaccagaaggataactctcaggagggaaagact
gacaatgtctatatcgactgctatacactggagggaaaacagctctggcgtgtagatctg
ggcaagaatatccgagcaggtcagcattacacccagatgtgtgtggctgactttgactgt
gacggcaaggctgaactcataacaaagaccgctgacggcaccaaggacggcaagggcaag
gtcatcggcgatggcagcaaggactaccgcaacggcaagggttatatactggacggtcct
gaatatatgacactgtttgacggtcagacaggtgcagcacttgataccatcgacttccct
gttccacgcggcaaggtttcagactggggcgataactacggaaaccgtgtagacagaatg
aacagcggtatcgcttatcttgacggcgtacacccaagtgctatctacggcagaggctac
tacacaagacttacctggtctgcagttgatgtaagtaacaagaagctgaaagtcaggtgg
aagtacgattcgaccttcaacaaatccactaagggctggggctgcggcaaccacaatgtt
atggtagctgactgcgataacgacggcaaacaggagatattcacaggtgctaactgcatt
gatgacaacggcaagctgctgtggtcaacaggcgaccttcacggtgatgctatgcacgta
ggcgaccttatccccgacagagccggtcttgaagtatgggaatgccacgaggataaacca
tacggtgaaacttgctatgatgcaaagaccggtcagaagatattccacataaacaacagc
aaagatacaggacgctgtgtagccgacaatgtatgggcaggcagcaagggcgcagaattc
tggggcgctgcagacggtaatgtatacaatactaccggcaagaagataggcggaacaaag
cctgctcagaacttcctgatctactgggacggcgaccttgagcgtgagatcctcgacggc
aacaagatatccaagatgactggtgccgacaagatcgaccgcatattcacagctaacggc
tgcggttcaaataacagttccaagaacaatccctgtatgacagttgaccttttcggtgac
tggcgtgaggagctgatactcagaactgacgacaacaccaagctgcgtgtatggtgcaca
accaataccaccaaggtacgtcttaccacacttatgcatgatatgcagtacagggcacag
aactgctgccagcagagtgcatacaatcagcctccccatgtaagctattatctgggaagc
gatgcacctatccccgcaagacccaagataaagctgaataatagttataatccaggtcct
aatccaaacccagatcctgatcccgatcctacaccagatcccgtaatacccgaaactgac
atcatcgacggacaggtatacaccttcaagaatgtgaacagcggactttacctctcagtt
gaaggtgcagctgcagcaaacggcgctaatgtcgagcagggtaacgctaacggcaagcag
gtacagttcaaggcagtttctgctggtgacggatacttctatctggtatcacagctgggt
gacggcaagacctacgcaattgatgtaagcggcagacacacagaagatgaaacaaacatc
gagatatacgaattcaacaagggcgacaatcagaagttcaggatagacaagaattctgac
ggtacatacagcatcctcaccaagataacaaacggcaattctgcacttgacgtaaacggc
aaatctaccaatgcaggcgcaaacgtacagcagtacacctacaagggcagcacaaaccag
aaatggtatgcagaggcagttaagcagaacaacaacgataatcctcagaaccctcccgtt
gttcagacatcggatatcactgacggacagatctacactatcaagaacctcaacagcgga
ctttacctctctgttaagggttcaaatgccggaaacggtgtaaatgttgaacaggcagct
gcaaacggtgcacagaacaagttcaaggcagttgcagcaggtgacggatatttctatctg
gtatctcagctgggtgacggcaattcctatgcacttgatgtaaacggcagaaagacagag
gacggaactaatatcgagatctacaccttcaacaagggtgagaatcagaagttcaagttc
gtaaagaattctgacggaacatacagcattcttacaaagatcactgacggaaagtctgca
cttgatgtaaacggacagtcccgcgatgcaggtgcaaatatacagcagtacacctacaac
ggcggcaataatcagaagtggtatgttgaaacttcttctacatcaggcaatatcactaca
ggcagctatcctgtggtaacaagcatcgaatacaacgcactttatcatcagttcaagatg
aactggacatccgtaaagaacgctgaaaagtacggtatcgctgtatacctcgcaggcaag
tggagagttcagacttacaccaatgatactacattcacatcacccaagctgaaggctggc
gacagatacagagtactcgttgctgcaagagttggcggtcagtgggatctctctgatctc
aaagaaagatctgtcattataagtatcaagtaa
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