Ruminococcus albus: Rumal_2918
Help
Entry
Rumal_2918 CDS
T01387
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ral
Ruminococcus albus
Pathway
ral03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ral00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Rumal_2918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ral03021
]
Rumal_2918
03400 DNA repair and recombination proteins [BR:
ral03400
]
Rumal_2918
Enzymes [BR:
ral01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Rumal_2918
Transcription machinery [BR:
ral03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Rumal_2918
DNA repair and recombination proteins [BR:
ral03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Rumal_2918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ADU23384
UniProt:
E6UJ36
LinkDB
All DBs
Position
complement(3279324..3282914)
Genome browser
AA seq
1196 aa
AA seq
DB search
MDFNVFESIKIGLASPEKIREWSYGEVTRPETINYRTQKPEKDGLFCERIFGPHKDWECH
CGKYKKIRFKGKICERCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGTPSRIGQMLEIS
QKRLEEVLYFTKYVVIDPGNTELEKGKLLTEQEYNDLLVKYDESDFKAGMGAEAIKQLLE
EIDLDQLSNELKEELKELPAGQKKIKLLKRLEIVEAFRASGNRPEWMILDVVPVIPPDIR
PMVMLDGGRYATSDLNDLYRRVINRNNRLKRMLELEAPDIIVRNEKRMLQEAVDALIDNG
RHGRPVTGPNNRAFKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMYQCGLPK
EMALELFKPFVMKRLVDTNPQINIKSARKAVERARPEVWDALENVIQGHPVMLNRAPTLH
RLGIQAFEPILVEGRAIKLHPLVCTAFNADFDGDQMAVHLPISVEAQAEARFLMLAANNL
LKPSDGRPVAVPSQDMLLGSYYLTLQKTGEPGEGKVFRDVNEAIMAYDNHDVTLHAAIKV
RITRQIGDKTVSKIIDATVGRLIFNSIIPQNLGYVDRTSSEKQFDLEVNFLVKKKQLGDI
IDRCIQRHGTTTTSEVLDNIKALGYKYSTKSAITVAVCDADIPASKKDILAEADALVEKV
DKQYKRGYISREEKSKKFIEIWNAATDKVTDALKASYDTEHNPIHMMADSGARGSINQIR
QLAGMRGLIANTSGSTIEMPIRANYREGLNILEYFISSRGARKGLADTALRTADSGYLTR
RLVDVSQDVIIRHKDCGTTVGIEIFDIKNGNEMIEPLSERLVGRYLVESLKDPKTGELIC
SKDKLISEHDAAKIVAALEEEGKTSIQIRSVLQCKARNGVCAKCYGANLANGNIVQVGEA
VGVISAQSIGEPGTQLTMRTFHTGGIASAEDITQGLPRVEELFESRKPKGAAIISKIGGV
VRIEEIKKTKQITVTEDIIPDGRIEPAFETYPIPYGYKIRVRDGQTVIPGEPLTEGSINP
ADILAVNGEKAVQNYIITEVQKVYRLQGVDINDKHIEVIVRQMMRKVKIDDPGSSYRLPG
ELVDKYEVDRLNEEIQAQIDAGDESARLITTLPVLQGITKASSYSDSFLSAASFQETTKA
LTDAAIRGKTDKLQGLKENVIIGKLIPAGTGMDVYNKVEIVKNESGAHTAPTESFI
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
ttggattttaatgtatttgaatcaataaagatcggtctggcatctcccgaaaagatcaga
gaatggtcatacggtgaggtcacaagacccgaaaccataaattaccgtacacagaagcct
gaaaaggatggtctgttctgcgaaaggatattcggaccgcacaaggactgggagtgtcac
tgcggtaagtacaagaagatccgtttcaagggcaagatatgcgaacgctgcggcgttgag
gtaacaagggctaaggtaagacgtgagagaatgggtcacatcgaactggctgcacctgta
tcacatatctggtacttcaagggcacaccctcccgcatcggtcagatgctggagatctcc
cagaaaagactggaagaagtgctgtatttcacaaagtatgtagtaatagaccccggcaac
accgagcttgaaaagggcaagctgcttactgagcaggagtataacgatctgctggtaaag
tatgacgagagcgatttcaaggcaggcatgggtgctgaggctatcaagcagctgctggag
gagatcgacctcgatcagctttcaaatgaactgaaggaagagctcaaggagctgcctgca
ggtcagaagaagatcaagctgctgaaaagactggagatcgtagaggcattcagggcttcg
ggcaacagacccgaatggatgatactggacgttgttcctgttatcccccccgatatcaga
cctatggtaatgctggacggcggcagatacgctacctccgacctgaacgatctttacaga
agagttataaacagaaacaaccgtcttaaaaggatgctggaactggaagctcccgatatc
atcgtaagaaatgaaaagagaatgctccaggaagctgttgacgcactgatcgacaacggc
agacacggcagacctgttacaggtcctaacaacagagcgttcaagtccctttcggatatg
ctgaaaggtaagcagggacgtttccgtcagaacctgctgggtaagcgtgttgactactca
ggacgttccgttatcgtcgtaggccccgagctgaaaatgtatcagtgcggtctgcctaag
gagatggcactggagctgttcaagcccttcgttatgaagagacttgttgacacaaatcct
cagatcaatataaagagcgcaagaaaagcagtcgagagagcacgccccgaggtatgggac
gctctggagaacgttatccagggtcaccctgtaatgctgaaccgtgcgcctacactgcac
agactgggtatccaggcattcgagcccatactcgttgagggcagagctatcaagctgcac
cctctggtttgtacagcgttcaacgccgacttcgacggcgaccagatggcggtacatctg
cctatatccgttgaggcacaggctgaggcaagattcctcatgctggctgctaacaacctg
ctgaagccttcggatggacgtcctgtggctgttccttctcaggatatgctgctgggttca
tactacctgactctccagaagacaggcgaacccggtgaaggcaaggtgttcagagatgtc
aacgaggctatcatggcttatgataaccacgatgttactctccacgcagctatcaaggta
aggatcacacgtcagatcggtgacaagacagtatccaagatcatcgacgctactgtggga
agacttatcttcaactccattatcccccagaatctgggctatgttgacagaacaagctcc
gagaagcagttcgacctggaagtaaacttcctcgtaaagaagaagcagctgggcgatatc
atcgacagatgtatacagagacacggtactacaactacttccgaagttcttgataacatc
aaggcactgggctataagtactccaccaagtctgccataaccgttgcggtatgcgatgca
gatatccccgcttcaaagaaggatatcctcgcagaagccgatgcactggtcgaaaaggta
gacaagcagtacaagagaggttatatctcaagagaagaaaagtccaagaagttcatcgag
atctggaacgctgctactgataaggtaacagatgcactgaaggcaagctacgacaccgag
cacaatcctatccatatgatggcggactccggtgcccgtggttcgataaaccagataaga
cagctcgcaggtatgcgtggtctgatcgccaatacatcgggttctaccatcgagatgcct
atcagagctaactaccgtgaaggtcttaacatactggaatacttcatatcctcccgaggc
gcacgtaagggtctggctgataccgctctgcgtaccgctgactcgggttacctgacaaga
cgtcttgttgacgtatctcaggacgttatcatcagacacaaggactgcggcactaccgtt
ggtatcgagatattcgatatcaagaacggcaacgaaatgatcgagcctctgagcgagaga
cttgtgggcagataccttgttgaatccctcaaggatcccaagacaggcgagctgatctgc
tccaaggataagctgataagcgagcacgatgctgccaagatcgttgctgcactggaagaa
gagggcaagacctctatccagatcagatcggtactgcagtgtaaggcaagaaacggcgta
tgcgctaagtgctacggcgctaacctggcaaacggcaatatagtacaggtcggtgaagct
gtcggcgttatctccgcacagtccatcggtgagcccggtacacagctgaccatgagaaca
ttccataccggtggtatcgcatcggcagaagatatcacacagggtcttccccgtgtcgag
gaactgttcgagtccagaaagcccaagggcgcagctatcatctccaagatcggcggcgta
gttcgtatcgaggagatcaagaagacaaagcagatcaccgtaacagaggatatcattccc
gacggacgcatcgagcccgcattcgagacttatcctataccttacggctacaagatcagg
gttagagacggtcagaccgttatacccggtgagcctctcaccgagggttcgatcaaccct
gctgatatactggctgttaacggcgaaaaggctgtacagaactacatcatcaccgaagtt
cagaaggtttaccgtctgcagggtgttgatatcaacgataagcatatcgaagttatcgtt
cgtcagatgatgagaaaagtcaagatcgacgatccgggttcaagctacagacttcccggc
gaactggttgacaagtacgaagttgacaggctcaacgaagagatacaggcacagatcgat
gcaggcgacgagagcgcaagactcatcacaacactgcctgttctccagggtatcaccaag
gcttccagctactccgacagcttcctttccgcagcgtccttccaggagaccacaaaggct
cttaccgacgcagctatcagaggcaagacggataagctccagggccttaaagaaaatgtt
atcatcggtaagctcatacccgcaggtacaggtatggacgtttacaacaaggttgagatc
gtcaagaacgagagcggcgcacatactgctcccactgaatcgttcatctga
DBGET
integrated database retrieval system
