Ruminococcus albus: Rumal_3017
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Entry
Rumal_3017 CDS
T01387
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ral
Ruminococcus albus
Brite
KEGG Orthology (KO) [BR:
ral00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ral03016
]
Rumal_3017
Enzymes [BR:
ral01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Rumal_3017
Transfer RNA biogenesis [BR:
ral03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Rumal_3017
Prokaryotic type
Rumal_3017
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
PUA_3
Motif
Other DBs
NCBI-ProteinID:
ADU23482
UniProt:
E6UE92
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All DBs
Position
3389683..3390582
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AA seq
299 aa
AA seq
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MTDKEISGVIAVYKPAGWTSFDVVAKLRGILHTRRIGHGGTLDPMAEGVLPVFVGKATKA
CDILPDVKKGYHAGFRLGITTDTQDITGTVLKEDGMAVTAEEFKTAAEKFIGKIMQVPPM
YSAVKVDGKKLYELAREGKVIEREAREITVLSLVTDDYDEVTREGHMTVLCEKGTYIRTL
INDIGDMLGCGGAMTSLVRTYSAGLALEDCLTIEDIQQRVDENGAESVLTRLDKCFEVYP
EVRLGARITALYKNGVKLRADQVDAHEGTVYRVYGADGGFIGLGRMADGGFRSVKNFFV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgacggataaggaaataagcggtgttatagcggtatacaagcccgcaggctggacatct
ttcgatgtcgtggctaagctgaggggtatactccatacacgcaggataggtcacggtggt
acgctcgaccctatggcggagggcgtgctgcctgtatttgtaggaaaagccaccaaggct
tgcgatatacttcccgatgtaaaaaaagggtatcatgcggggttcaggttaggtataact
actgatacgcaggatatcactggtacagtgctcaaagaggacggcatggctgtgacggct
gaggaattcaaaacggcagctgaaaagttcatcggaaagataatgcaggtgccgcccatg
tattcggcggtgaaagttgacggcaaaaaactctacgagctggcacgcgaaggaaaagtc
atcgagcgcgaggcgagggagataactgtgctttcactggtgacagatgattacgatgag
gtgacccgagagggacacatgacagtgctctgcgaaaagggcacgtacatacgcacactt
ataaatgacataggcgatatgctgggctgcggcggagctatgacctcactggtgaggacg
tactcggcagggctggcgctggaagattgcctgaccatagaggatatacaacagagagtc
gatgagaacggtgcagaaagtgtactgacacggctggacaaatgctttgaggtatacccc
gaagtcagactgggagcgcggataactgcgctttacaagaacggtgtgaagctgagagct
gaccaggtggatgcgcatgaaggtactgtataccgcgtatacggcgccgacggaggattc
atcgggcttggcaggatggctgacggaggattcagaagcgttaagaattttttcgtatga
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