Roseobacter phycocola: AB4K19_004725
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Entry
AB4K19_004725 CDS
T11367
Name
(GenBank) type IV secretory system conjugative DNA transfer family protein
Organism
ralg Roseobacter phycocola
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
T4SS-DNA_transf
TrwB_AAD_bind
TraG-D_C
AAA_25
DUF87
AAA_16
Motif
Other DBs
NCBI-ProteinID:
XVE41067
LinkDB
All DBs
Position
complement(980961..982910)
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AA seq
649 aa
AA seq
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MQRKVTSADVTEASIAFWGGFAGSLALCIAIHFIAPGFRNDDFLRMVLVVLFFGCLASAT
WSLTKPFADFTSTKIRWQYAEAGPSVMQSVERYLVRINRYVAMIGNILTIGIGALGLAVL
TDWELFSPLASLRKPLYWIGFGAIAAAPLASLVMSSRLREAYILRVQIDEEMEISGTKTR
DTTHLAEERAEAAREAVEVTAPMSFRAGGYDWRVPDFYKNVAIFGQSGTGKTVCVLNALL
DGLLGATGAAGQPAAALILDPKGDFRDKIDALAQRHGRKRDLLIIDPDQPKTSMRWNPLD
TDDDAQEVAGRFAAVMETLNPSGGDDAFWIDNTKRLVQNLIALLRFARPNEPPSLIEVYE
AAMSDEKIKAWGKQVPDGVYDGNVEVSRTFDYFFDVWFTMPTDTRGTVRSFVSNMLGTFL
TPPYDDLFSGHSTAQIGEVIDTGGILYVNMPIADKEVMSRVVSTFIKLEFYREVLKRRDK
PRPSFFLCDEFQSYFTTGQGRGDADAFERTRQSNHANIVAFQNLNALFKQTDRQEPVLNM
LGNCGTKIFLRNTERETNEFASDLFGEHIETMTGASVNVAQGARGRGSGAAISNTAQYSA
RVKKDEFANLGVPSREENEPFAEAIVHLAARSKVEMKKMRWKVHPIVER
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
ttgcagcgcaaggtcacttccgccgatgtgacggaagcaagcatcgccttctggggcggc
tttgcggggtctttggcgctttgtattgcgattcacttcatcgctcccggtttccgaaat
gacgactttttgcgcatggtgcttgttgtgctgttttttgggtgccttgcttctgcaaca
tggagtttgaccaaaccctttgccgatttcaccagtaccaaaattcgctggcagtatgct
gaagcaggtccatccgtcatgcaatcggtagagagatacctggtacgcatcaatcgttac
gtagcaatgatcggcaatattctgaccatcgggatcggggccttgggacttgctgtccta
accgattgggagctgttttcaccgcttgcgagcttgcgtaagcccctttactggatcggt
tttggtgcaatcgccgccgcgccgttggccagcctggttatgtccagccgcttgcgagag
gcttatattttgcgcgttcagatagatgaggagatggaaatctccggcacaaagacacgc
gacacaactcatctggcggaggagcgcgcggaagctgcacgggaggcggttgaagtcaca
gcccccatgtccttccgcgctggcggttatgattggcgggtccctgacttctacaagaac
gttgcgatcttcggccaatccgggacaggtaagacggtttgcgtactgaacgcactgctt
gacggcttgttgggggcaacgggtgctgccggtcaaccagctgcggcgctgatcctcgat
ccaaagggggacttccgcgataaaatcgatgctcttgcccaacgccatggccgcaaacgt
gatctgctaatcatcgatcctgatcagcccaagacctcaatgcggtggaatccgctggat
acggacgatgacgcacaggaggtagcaggtcgctttgctgccgtaatggagacactgaat
ccatcaggcggcgatgacgcgttctggatcgataacacaaaacgtctagttcaaaatctg
atcgcgctgttacgctttgcccgcccgaacgagccgccgtcgcttatcgaagtgtacgag
gccgcaatgtcggatgaaaaaatcaaagcatggggcaaacaggttcctgacggtgtctat
gacggtaatgtcgaagtgtctcgcacctttgactacttctttgatgtctggttcacgatg
ccaaccgatacgcgagggacagtgcgcagcttcgtgtcgaatatgctgggcacgttcttg
acacccccttatgacgatcttttctcaggacattcgaccgctcagattggtgaagtcatc
gacacgggtggcatcctctatgtcaatatgccgattgcggacaaagaggtaatgtcgcgc
gtcgtctctacattcatcaaactcgaattctaccgcgaagttcttaagcggcgcgacaaa
ccgcgcccgtcattctttctctgcgacgaattccaatcttacttcacaaccggccagggc
cgcggagatgcggatgcctttgagcggacccggcaatccaatcacgcgaacatcgtggct
ttccagaacttgaacgcgcttttcaaacagacagaccgtcaagaacctgtgctgaacatg
ctgggcaactgcgggacaaagatattcctgcgtaacaccgaacgcgaaaccaatgaattc
gcctctgatctcttcggcgagcatattgaaacaatgacaggggcaagcgtaaacgtcgcg
cagggcgcgcgtggacgcgggagtggcgccgcgatttccaacaccgcccagtactcggcc
cgggtcaagaaggatgaatttgcgaacctgggtgtgccgagccgagaagaaaacgaacca
tttgcagaagctatcgtgcacttggcagcgcggtcaaaagttgaaatgaaaaagatgcgc
tggaaggtgcatccgatcgtggagcgataa
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