KEGG   Roseobacter phycocola: AB4K19_006730
Entry
AB4K19_006730     CDS       T11367                                 
Name
(GenBank) sigma-54-dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
ralg  Roseobacter phycocola
Pathway
ralg02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ralg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AB4K19_006730
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:ralg02022]
    AB4K19_006730
Two-component system [BR:ralg02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   AB4K19_006730
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 FleQ cREC_REC OKR_DC_1_N AAA_16 AAA_19 AAA T2SSE VpsR AAA_2
Other DBs
NCBI-ProteinID: XVE41445
LinkDB
Position
1355262..1356674
AA seq 470 aa
MSDILIVDDERDIRELISDILKDEGFATRLAGNSDDAMAAINGEPPALIILDIWLKDSRM
DGIDILKAVRRDNPDVPVVIISGHGNIEIAVAAIKQGAYDFIEKPFNIDQLLVVIRRAME
TSRLRRENQSLRRRDDTRSEMIGSSPAFRTLVSNLDKVTKSNGRVMLTGPAGSGKEVAAR
YIHANSNRADGPFVTVNCAGVAPDRMEEVLFGRETPERGVEPGLLEEAHGGIIYFDEVAD
MPIGTQSKILRVLVDQQFQRVGGNDKVRVDLRVISSTNRDLEEAIAAGTFREELYHRLNV
VPIRVPALEERREDIPELARHFIAEMNTSQGLPFRELTDDAEALMQTMVWPGNVRQLKNL
IERVLILGDGNGEIEARELPGNEEGGGDQNRVVLSGALATLALREAREAFEREYLLTQIN
RFGGNISRTANFVGMERSALHRKLKSLGVVTSAKSGARVAQLDEEPETAD
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgagtgatattctgattgttgatgacgaacgcgacatccgcgagctgatctctgacatc
ctgaaggacgaggggttcgcgacgcggctggctgggaattcggacgacgcgatggctgcc
atcaatggcgagccacccgcgctgatcattctggatatctggctgaaggacagccggatg
gatggtattgatatcctcaaggccgtgcgccgcgacaatccggatgtgccggtggtgatc
atttccggccatggcaacatcgaaattgccgtggctgcgatcaagcagggcgcttacgac
tttatcgaaaagcctttcaacattgaccagttgctggtcgtgatccggcgcgccatggag
acctcccggttgcggcgcgaaaaccagagcctgcgccgtcgtgacgatacgcgctctgag
atgatcggcagttcaccggcgttccgtacgctcgtgagtaacctcgacaaggtgaccaaa
tcgaacggacgcgtgatgctgaccggacctgcgggcagcggcaaagaggttgcggcccgg
tatattcacgccaattccaaccgcgcggatggtccgtttgtgaccgtcaactgtgccggc
gtcgcacccgaccggatggaagaggtgctgttcgggcgggaaacaccggagcgcggtgtg
gaaccgggtctgctcgaagaggcccatggcgggatcatctatttcgatgaggtcgccgat
atgccgatcggtacccagtcgaaaatcctgcgcgtgctcgtggatcagcagttccagcgg
gttggtggcaatgacaaggtgcgggtggacctgcgggtgatttcttcgacgaaccgggat
cttgaggaagccattgcggcaggaacgttccgcgaggagctataccacaggctgaacgtg
gtgccgatccgggtgccagctctcgaagagcggcgcgaggacattcctgagctcgcgcgt
cattttatcgccgagatgaacacatcgcagggtctgccgtttcgggagcttaccgatgat
gccgaggcgttgatgcagacgatggtctggcccggaaatgtccggcaactgaaaaacctg
atcgaacgcgtgctgatactgggtgacggtaacggtgagatcgaggcgcgggaactgccg
ggcaatgaagagggcggcggtgatcagaaccgggttgttctgtccggagcactggccact
ctggcactgcgcgaagcgcgcgaagcctttgagcgtgaatatctgctgacgcagatcaac
cggtttggtggcaatatttcccgcaccgctaactttgtcggcatggaacgctccgcgctg
caccgcaaactcaagtctctgggcgttgtgacctcagcaaaatccggtgcacgcgtggca
cagctggacgaggaacccgaaacggcggactga

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