Roseobacter algicola (ex Choi et al. 2025) (nom. illeg.): AB4K19_018260
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Entry
AB4K19_018260 CDS
T11367
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ralg Roseobacter algicola (ex Choi et al. 2025) (nom. illeg.)
Pathway
ralg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ralg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB4K19_018260 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ralg03019
]
AB4K19_018260 (pnp)
03016 Transfer RNA biogenesis [BR:
ralg03016
]
AB4K19_018260 (pnp)
Enzymes [BR:
ralg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AB4K19_018260 (pnp)
Messenger RNA biogenesis [BR:
ralg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AB4K19_018260 (pnp)
Transfer RNA biogenesis [BR:
ralg03016
]
Prokaryotic type
tRNA degradation factors
AB4K19_018260 (pnp)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XVE39877
LinkDB
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Position
complement(3687960..3690098)
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AA seq
712 aa
AA seq
DB search
MFNETKKSMQWGEETLTLETGKVARQADGSVIATLGETSVMANVTFAKKQKPGQDFFPLT
VHYQEKYYAAGKVPGGFFKREARPTEKETLTARLIDRPIRPLFVPGFKNEVLVMCTVLSH
DLVNDPDMVAMIAASAALTISGAPFMGPIAGARVGFEDGDYILNPTVDDMQDLRLNPEQR
LDLVVAGTKDAVMMVESEAYELTEDEMLGAVKFAHEQIQPVIDLIISLAEEAAKEPFDFQ
PADYSDLSAAIAAAGEADMRAAFAISDKQERTSAVAAAREKIMEALSEEQAEDPNLGSAM
KGLEASILRGDVVKTGKRIDGRATDEIRDIVCETGMLPRTHGSALFTRGETQGLVVTTLG
TGDDEQFIDALHGNFKSNFLLHYNFPPYSVGEAGRVGPPGRREIGHGKLAWRALQAVLPA
ATDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKSAVAGVAMGLILEEDGSYA
ILSDILGDEDHLGDMDFKVAGTENGITSLQMDIKVAGITPEIMEKALAQAKDGRMHILGE
MNKAITGAADFSVHAPRIETMQIPTDKIREVIGSGGKVIREIVEVSGAKVDINDEGTIKI
ASPNGDSIQKAYDMIHAIVAEPEEGAIYTGTVVKIVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQEVKVKLLGFDDRGKVRLSMKVVDQETGEEVKKEQAPAEE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacgaaacgaaaaagtcgatgcagtggggcgaggaaacgctcacgctggaaaca
ggaaaagtggcccgtcaggcggatgggtcggtgattgcgacgcttggtgagaccagcgtc
atggcaaacgtcacctttgccaaaaaacagaaacccggtcaggatttctttccgctgact
gttcactatcaggaaaaatactatgccgcgggtaaagtgcccggcggtttcttcaagcgc
gaggcgcgcccgacggagaaagagacgctgaccgcgcgtctgatcgaccgtccgatccgc
ccgctgtttgtccccggcttcaaaaacgaagtgttggtgatgtgtaccgtgctgtcgcac
gatctggtcaatgaccccgatatggtcgcgatgatcgcggcctctgcggcgctgactatt
tccggcgcacctttcatgggcccgattgccggtgcgcgcgtgggctttgaggatggcgac
tacatcctgaacccgaccgtcgacgacatgcaggatctgcgcctgaaccctgagcagcgc
ctcgatctggttgtcgcaggcaccaaagatgccgtgatgatggtcgaatccgaagcttac
gagctgaccgaagatgaaatgctcggcgctgtgaaattcgcgcatgagcaaatccagccg
gtcatcgatctgatcatctctctggcagaagaggcggccaaggagccgttcgacttccag
cctgcagattattccgatctgtccgcagcgattgccgctgccggtgaagccgacatgcgc
gcagcctttgccatctctgacaagcaggagcgtacctcagccgtcgccgccgcccgtgag
aaaatcatggaagcgctgagcgaagagcaggctgaagatccgaacctcggctccgcgatg
aaaggcctcgaggcctccatcctgcgcggcgacgttgtgaaaaccggcaagcggattgac
ggtcgtgcgaccgacgaaatccgcgacatcgtgtgcgaaaccggcatgctgccgcggaca
cacggttcggcgcttttcacgcgcggtgagacgcagggcctcgtggtcacaacactgggc
acaggcgatgatgaacagttcatcgacgcgctgcatggtaacttcaaatccaacttcctg
ctgcactacaacttcccgccctattcggtcggcgaagcgggtcgcgttggccctccggga
cgtcgtgaaatcggtcacggtaaactggcatggcgcgctctgcaggcggtgctgcccgca
gcaactgatttcccgtacaccatccgtgttgtatccgagatcacagaatccaacggctcg
tcctcgatggcgtcggtctgcggtggctctctgtcgatgatggacgcaggcgtgccgctg
aagtcggcggtcgcgggtgttgccatgggtctgatcctcgaagaagacggctcctatgcg
atcctgtcggacatcctgggtgacgaagaccacctgggcgacatggacttcaaagtggcg
ggtaccgaaaacgggatcacctcgctgcagatggacatcaaggttgcaggcatcacgccc
gagatcatggagaaggccctcgcgcaggcgaaagacggccggatgcatatccttggtgag
atgaacaaagccatcacaggtgccgcggacttctccgtgcatgcgccgcgcattgaaacc
atgcagattcccaccgacaagatccgcgaagtcatcggatcgggcggcaaggtcatccgc
gagatcgtggaagtgtcaggcgccaaggtcgacatcaacgacgaaggcaccatcaagatc
gcatccccgaacggcgactcgatccagaaagcctatgacatgatccacgcgatcgtggcg
gagccagaagaaggcgcgatctacaccggtactgtcgtcaagattgtcgactttggtgca
tttgtgaacttctttggcaagcgcgacggtctggtgcacgtgtcccagatcgaaaaccgc
cgcctgaaccaccccagcgatgtgctgaaggaaggtcaggaagtgaaggtcaaactgctg
ggctttgacgaccgcggtaaggttcgcctgtcgatgaaagttgtcgaccaggaaaccggc
gaagaagtcaaaaaggaacaggcgcctgcagaagagtaa
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