Roseobacter phycocola: AB4K19_019445
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Entry
AB4K19_019445 CDS
T11367
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
ralg Roseobacter phycocola
Pathway
ralg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ralg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AB4K19_019445
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ralg01007
]
AB4K19_019445
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ralg03016
]
AB4K19_019445
Enzymes [BR:
ralg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
AB4K19_019445
Amino acid related enzymes [BR:
ralg01007
]
Aminoacyl-tRNA synthetase
Class I (A)
AB4K19_019445
Transfer RNA biogenesis [BR:
ralg03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
AB4K19_019445
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
Anticodon_2
tRNA-synt_1
tRNA-synt_1b
tRNA-synt_1c
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
XVE40102
LinkDB
All DBs
Position
3942594..3944177
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AA seq
527 aa
AA seq
DB search
MSEIRDAAMTSKAWPFEEARRVLKRYAKAPPEKGYVLFSTGYGPSGLPHIGTFGEVLRTT
MVRRAFEQISDIPTKLICFSDDLDGMRKVPGNVPQQDMLAEHMHKPLTDVPDPFGTHESF
GHHNNAMLRRFLDTFGFDYEFYSAREFYRSGQFDDVLRRAAERYDDVMKVMLKSLREERQ
QTYSIFLPIHPETGRVLYVPMKNVDAVNHTVTFDDEDGREWTLPVTGGNVKLQWKPDFGA
RWAALGVDFEMYGKEHATNTAIYDRICEILGGKKPEHFSYELFLDDKGQKISKSSGNGIS
IDEWLSYASTESLSYFMFQKPKTAKRMYFDVIPKAVDEYHQQLRAYVGQDVVQRLNNPVW
HIHSGDVPTSNMVVPFSMLLNLASVSAAEDKSQLWGFIQRYAPETNAENNPDMDAAAGFA
VRYYNDFVKPGKVYRLATDQEREALQDLRDQLAAWDGPVDDEALQSVVYACGRERFDPLR
AWFTALYEVLLGASQGPRFGGFIALYGVQETIALIDAALAGELVKDT
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagatccgtgacgccgcgatgaccagcaaagcatggccttttgaggaagcgcgc
cgggtgctcaaacgctatgccaaggcgccgccggaaaagggctatgtgcttttctccacc
gggtacgggcccagcggtctgccgcatatcggcacctttggcgaagtgctgcgcacgacc
atggtgcgccgtgcgtttgagcagatctctgacattccgaccaaactgatctgtttttcg
gacgatctggacggcatgcgcaaggtgccgggcaacgtgccgcagcaggacatgctggcg
gagcacatgcacaagccgctcacggatgtgccggaccctttcggcacgcacgaaagcttt
ggccatcacaacaacgccatgctgcgccggtttctcgatacgtttggctttgactatgag
ttctattctgcgcgggagttttaccggtcggggcagtttgatgacgtgctgcgccgggcc
gccgagcgctatgacgatgtgatgaaggtgatgctgaagtcgctgcgcgaagagcgccag
cagacctattcgatctttctgccgatccatccggagaccgggcgggtgctttatgtgccg
atgaaaaacgtcgatgcggtgaaccacacggtcacatttgatgatgaggatggccgtgaa
tggacgctgccggtcacaggcggcaacgtgaagctgcagtggaagccggatttcggagcg
cgctgggcagcacttggcgtggatttcgagatgtatggcaaggaacatgcaaccaacacc
gcgatctatgaccggatctgcgagatcctgggcggcaaaaagccggagcatttcagctat
gagctgttcctggacgacaaggggcagaagatttcaaagtcttccgggaatggcatctcg
atcgacgaatggctgagctatgccagcaccgaaagcctgtcgtacttcatgttccagaag
cccaaaacggccaagcggatgtattttgacgtcattcccaaggcggtggatgaataccat
cagcagctgcgggcttatgtggggcaggatgtagttcaacggttaaacaatcctgtctgg
cacatccattcaggtgatgttccgacgtcaaatatggtggtgcccttctcgatgctgctg
aacctggcgagcgtttcggcggccgaggacaaatcgcagctctggggctttatccagcgc
tatgcacctgaaaccaatgcggaaaacaatcctgacatggatgctgctgcgggctttgcc
gtgcgctattacaatgattttgtgaaaccgggtaaggtgtaccgcctggccacagatcag
gagcgcgaggcgttgcaggatctgcgggatcagctggcggcctgggacggtccggtggat
gatgaggcgctgcagtcggtcgtctatgcctgcggccgcgagcggtttgacccgctgcgc
gcctggttcacagcgctctatgaggtgctgctgggcgccagccagggaccccggtttggc
gggttcatcgccttgtacggtgtgcaggaaaccattgccctgatcgatgctgcccttgcg
ggtgaactggtaaaagacacctga
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