KEGG   Roseobacter phycocola: AB4K19_019475
Entry
AB4K19_019475     CDS       T11367                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
ralg  Roseobacter phycocola
Pathway
ralg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ralg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AB4K19_019475 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ralg03400]
    AB4K19_019475 (uvrB)
DNA repair and recombination proteins [BR:ralg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AB4K19_019475 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AB4K19_019475 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 UB2H DUF87 AAA_22 AAA_16 Kinesin AAA eIF3_p135
Other DBs
NCBI-ProteinID: XVE40108
LinkDB
Position
complement(3947032..3949233)
AA seq 733 aa
MSYAHTDSSDAVLSNPAPDVRDRPKLEGGRKFVLATEFEPAGDQPTAIAELADGVTSGER
DQVLLGATGTGKTFTMAKVIEETQRPAIILAPNKTLAAQLYGEFKGFFPDNAVEYFVSYY
DYYQPEAYVARSDTYIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVET
YGAMTQDLKTGSMYDQRQVMADLVAQQYRRNDQAFQRGSFRVRGDSLEIFPAHLEDRAWK
LSFFGEELESITEFDPLTGEKTDTFDQIRVYANSHYVTPKPTMQQAIIGIKKELKIRLDQ
LVSEGKLLEAQRLEQRTNFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDHA
IVFADESHVSVPQIGGMYKGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVS
ATPAGWEIEQAGGVFTEQIIRPTGLIDPEIEIRPVEMQVDDLLDEVRRVAENGYRTLVTT
LTKRMAEDLTEYMHEQGIRVRYMHSDIDTIERIEILRDLRLGAFDVLIGINLLREGLDIP
ECGLVAILDADKEGFLRSETSLIQTVGRAARNAEGRVIMYADRITGSMERAIGETNRRRA
KQLAYNEEHGITPQTVKKNVEDILAGLYKGDVDMNRVTATVEKPLAGGNLQAVLDGLRAD
MRKAAENLEFEEAARLRDEVKRLEAVDLAVADDPMARQYAVEKAVDDAQKASGRSTMGRG
GMRGGVKRKKRGR
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgtcttacgctcacactgacagttctgacgctgttctttccaatcctgcgcccgatgta
cgcgaccgccccaagctggaaggcggccggaaattcgtgctggccactgaatttgaaccg
gccggtgaccaacccactgccattgccgaactggccgatggcgtcacctccggtgagcgg
gatcaggtgctgctgggagctacaggcaccggcaaaacctttaccatggccaaggtgatc
gaagagacccagcgtccggcgattatcctggcgccgaacaagacactcgccgcgcagtta
tacggtgagttcaaaggcttctttccggacaacgccgtcgaatattttgtgtcctactac
gactactaccagcccgaggcctacgtcgcgcgcagcgacacctacatcgagaaagaaagc
cagatcaacgaacagatcgaccggatgcgccactcggccacccgggcgctgctggaacgc
gacgatgtgatcatcgtggcctcggtctcgtgcatctacggcatcggctccgtcgaaacc
tatggcgcgatgacccaggatctgaaaaccggctctatgtacgaccagcgccaggtcatg
gccgacctggtggcccagcagtaccgccgcaatgatcaggccttccagcgcgggtcgttc
cgcgtgcggggcgacagcctcgaaatcttccccgcccacctcgaagaccgcgcctggaaa
ctctcgttctttggcgaagaactggaatccatcacggaattcgacccgctgacgggcgag
aaaaccgatactttcgaccagatccgcgtctacgccaacagccactatgtgacgcccaaa
ccaaccatgcagcaggcgatcatcggcatcaaaaaagagctgaaaatccgcctcgaccag
ctcgtgagcgagggcaaactgcttgaggcgcagcggctggagcagcgcaccaactttgac
ctcgaaatgctggaggccacgggcgtctgcaacgggatcgagaactattcgcgctatctg
acgggccgtgcaccgggcgagccgccccccacgctcttcgaattcattcccgatcatgcc
attgtttttgcagacgaatcccatgtctctgtcccgcagatcggcggcatgtacaaaggc
gactaccggcgcaaattcacgctcgccgaacacgggttccgcctgccctcctgcatggac
aaccgcccgctgaagttcgaggaatgggatgccatgcggccgcagtccgtctttgtctct
gccacgcccgccggctgggaaatcgaacaggccggtggtgttttcaccgaacagatcatc
cgccccacgggcctgattgaccccgaaattgaaatccggcccgtcgagatgcaggtggac
gatctgctcgacgaggtgcggcgcgtggccgaaaacggctaccgtacgctcgtgacgacg
ctcaccaaacgcatggccgaggatctgaccgaatacatgcacgaacagggcatccgcgtg
cgttacatgcactcggatatcgacaccatcgaacgcatcgaaatcctgcgcgatctgcgg
ctgggggcctttgacgtactgatcgggatcaacctgctgcgcgagggtctcgatattccc
gaatgcgggctcgtggccattctggacgcggacaaagagggctttctgcgctcggaaacc
tcgctcatccagaccgttggccgggccgcgcggaacgccgagggccgcgtgatcatgtac
gccgaccgcatcaccggctcgatggaacgcgccatcggcgagaccaaccggcggcgcgcc
aaacagctggcctataacgaagaacacgggatcacgccgcagactgttaagaaaaacgtc
gaggatattctcgccggtctctacaagggcgacgtggacatgaaccgcgtcacagcaacg
gtcgaaaaaccgctcgcggggggcaatctgcaggccgtgcttgacgggctgcgcgcggat
atgcgcaaggccgccgagaacctggagttcgaggaagccgcccgcctgcgcgacgaagtc
aaacgtctggaagcagtcgatctggccgtcgccgacgacccgatggcccggcaatacgcg
gtggaaaaggccgtggacgatgcccagaaagcctcaggccgcagcaccatgggccgcgga
gggatgcgcggcggggttaagcggaagaagcggggtcggtga

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