Rickettsia amblyommatis GAT-30V: MCE_00230
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Entry
MCE_00230 CDS
T01787
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ram
Rickettsia amblyommatis GAT-30V
Brite
KEGG Orthology (KO) [BR:
ram00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ram03016
]
MCE_00230 (truA)
Enzymes [BR:
ram01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
MCE_00230 (truA)
Transfer RNA biogenesis [BR:
ram03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MCE_00230 (truA)
Prokaryotic type
MCE_00230 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AFC69101
UniProt:
H8K3K7
LinkDB
All DBs
Position
complement(40120..40857)
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AA seq
245 aa
AA seq
DB search
MYRYKITIEYLGTDLAGWQRQAGVMSVQQILEEAIYKFSGEQVILFGSGRTDAGVHAIGQ
VAHFDLSKYLEPHKIITAVNYFARPYAVGVWNCELAPNNFHARFSATSRYYIYRIINRPY
PSVIDLNRAWWISSPLDVPAMQQAAAYLLGKHDFTSFRASSCQSKSPIKTLTELNIIKED
EEIKLYLSAPSFLHHMVRNIVGSLVLVGKNIWQVEQIKDVLEAKDRKAAGPTAPASGLYF
VKAAY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgatataaaattaccattgaatatttaggcacagatcttgcaggttggcaaaga
caagcaggagtaatgtcggtacagcagatattagaagaagcgatttataaattttccggt
gaacaggtgatattgtttgggtcaggaaggacagatgccggtgttcatgctataggtcaa
gtagcacattttgatctttcaaaatatttagaacctcacaaaattattacggctgtcaac
tattttgcaagaccgtatgccgtaggagtatggaattgtgaattagcccccaataatttt
catgctaggttttcagctacctctcgttattatatatatagaattattaatagaccttat
ccatcggtaattgatttaaatagagcatggtggattagttcacctttagatgttccggct
atgcaacaagctgccgcttatctattaggcaaacatgattttacttcatttagggctagc
tcatgtcaatcaaaatcaccgattaaaactttaactgaacttaatattattaaagaagat
gaagaaataaaattatatctttcagccccgtcatttttgcatcatatggtacgtaatatt
gtcggcagtttagtacttgttggtaaaaatatttggcaggtagaacaaattaaagatgtt
ctagaagccaaagatagaaaagccgccggtcctactgctcccgcctccggtctttatttt
gtgaaagcagcgtattaa
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