Rickettsia amblyommatis GAT-30V: MCE_00240
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Entry
MCE_00240 CDS
T01787
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ram
Rickettsia amblyommatis GAT-30V
Brite
KEGG Orthology (KO) [BR:
ram00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MCE_00240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ram03021
]
MCE_00240
Transcription machinery [BR:
ram03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MCE_00240
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_2
Sigma70_r1_1
Nrap_D6
Motif
Other DBs
NCBI-ProteinID:
AFC69103
UniProt:
H8K3K9
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All DBs
Position
complement(41746..42870)
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AA seq
374 aa
AA seq
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MSNSNIDNDLDKIDSLLKKAKSKKIPVTYDDINNALPLNKNPSIRQLEEAILKFSDAGVD
ILESNEDDEIKLDIGMDEEFKLSTNVDNEPEDEVEEESISATDDPVRLYLKDMGGVDLLT
RENEVEIAKRIEEGHKTMTASLCRSPIAMRCFIVWYEDLVNEKMLLRDLIDLEANMLHDE
IPENDEEHSSETEGEEHEDNHLSMSRIETQILPNIIERMKKISFICEELLIEAKKCYEKS
FEPKVLQNSKKYNNLKLLINEVSEIHFNSKRTEEILGKMYGINRDLINKETAFLKLAEKY
GVTRQNFLDEYIGSVINAAWKEKMLKSKKVAWKELMTKESDYIDQMIAELSVIESKTGLL
VNDFKKLVNTIQKK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatagcaatatagacaatgatctagataaaatagatagtttacttaaaaaagct
aaatctaaaaagataccggtcacttatgatgatataaacaacgctcttcctctgaataaa
aatccttcaataagacaattagaggaagctatattaaaattttccgatgcgggagtagat
attttagaatctaatgaagatgatgaaattaagcttgatattggaatggatgaagaattt
aagctatctaccaatgttgataatgaacctgaggatgaggtagaagaagaaagtataagt
gctaccgatgatcctgtaagattatatcttaaggatatggggggagtcgatcttttaact
cgtgaaaatgaagtagaaatagcaaaaaggattgaggaaggacataaaacaatgactgct
tccttatgcagaagccctattgctatgcgttgttttatagtatggtatgaagatttagtt
aatgaaaaaatgttactacgtgatctgatagatttagaagctaacatgttacatgacgaa
atacccgaaaatgatgaagaacatagtagtgagaccgaaggagaagagcatgaggataat
cacttatctatgtctagaatagaaacgcagatattacctaatattatagagcgtatgaaa
aagatttcttttatctgtgaagagctactcattgaagctaaaaaatgttatgagaaatct
tttgaaccgaaggttttacaaaatagcaaaaaatataataatttaaaattattaataaat
gaagtttcggaaatacattttaattctaaaagaacggaagaaattttaggtaagatgtat
ggaataaatcgtgatttaattaataaagaaacagcttttttaaagcttgctgaaaaatat
ggagtaactcgccaaaatttccttgatgaatatataggatcggttatcaatgcagcatgg
aaagaaaaaatgctgaaaagtaaaaaagtcgcttggaaagagttaatgactaaagaatcg
gattatatagatcaaatgattgctgaattatcggttatagaatctaaaaccggtctttta
gttaatgattttaaaaaactagtgaatactatacaaaaaaagtga
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