Rickettsia amblyommatis GAT-30V: MCE_02025
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Entry
MCE_02025 CDS
T01787
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ram
Rickettsia amblyommatis GAT-30V
Pathway
ram03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ram00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MCE_02025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ram03400
]
MCE_02025
DNA repair and recombination proteins [BR:
ram03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MCE_02025
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MCE_02025
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
Kinesin
HH_RND_rel
AAA_7
AAA_22
Microtub_bd
AAA_5
DUF87
P-loop_SecA
LarB_N
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
AFC69392
UniProt:
H8K4E8
LinkDB
All DBs
Position
complement(355706..357691)
Genome browser
AA seq
661 aa
AA seq
DB search
MNNFSIISEYKPAGDQPKAIDEIIAGLSSKKRSQMLLGITGSGKTFTMANIIARTNRPTL
IMAHNKTLAAQIYSEMKSIFPKNAVEYFVSYYDYYQPEAYIARTDTFIEKDSSINEQIDL
MRHAATRSLLERRDVIVVSSVSCIYGLGSPDLYYQMMVNLEPGQSYPRDQLLKDLINLQY
ERNDIGFERGCFRVKGDNIDIFPSHYSDKAWRLSFFGNELEYIHEFDPLTGEKLAKLDKA
MVFGNSHFVMPQETVNNAISGIAEELQKRLEFLKSQDKPLETQRLNQRTQYDLEMLTETG
SCKGIENYSRFFTGRSAGEPPPTLFEYLPEDALLFVDESHVSVPQIRAMYNGDRARKEVL
VEHGFRLPSALDNRPLKFEEWEKLRPQTVFVSATPGPFELEETGGTVVELIIRPTGLLDP
ECIIKPATNQVEDLISEIQTTIAKGFRVLVTTLTKKMAEDLTAYLQELKYKTSYLHSNVH
TLERIEILRDLRQGTIDILVGINLLREGLDLPECGLVAILDADKEGFLRSEVSLIQTIGR
AARNSEGRVILYADKMTMSIDKAVSETLRRRQIQQEYNEKHGIIPKTINRTIHTLAEFEK
IDSKLDKKQAHTLFDNPAKLKTHIDKLKKEMLKAASNLEFEQAAKLRDQLKTLEEAALEL
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaataatttttctattatctcagaatataaaccggcaggtgatcaaccaaaagcaata
gatgaaattatagcagggttaagtagcaaaaaacgctcacaaatgttgcttggtattacg
ggatcaggcaaaacctttactatggcaaatattatagcgagaactaatcgtcctactctt
attatggctcataataaaactttagctgcccaaatctattcagagatgaaatcaattttt
ccaaagaatgccgttgaatactttgtctcatattatgattattaccagcccgaagcttat
atagcacgcaccgatacttttatagaaaaagactcatcaattaacgaacagattgattta
atgcgtcatgccgctacaagatcgctattagaacgccgtgacgttatagtagtttcttcc
gtttcctgtatttacgggcttggctctcccgatttatattaccaaatgatggttaatcta
gagcctggtcaaagctaccctcgtgatcagctactaaaagatttgataaatctacaatat
gagcgtaacgatatcggatttgagcgtggctgttttagagttaaaggcgacaacatcgat
attttcccctcacattacagcgataaagcttggcgtttatcgtttttcggtaatgaactc
gaatatatccatgaatttgatcccctaacaggtgaaaaacttgctaagctcgataaagct
atggtttttggtaattcacattttgtgatgcctcaagaaacggtcaataatgccatatca
ggtattgcagaagaattacaaaaacgcttagagtttttaaagtcacaagacaaaccactt
gaaactcaaaggctaaatcaacgtactcaatatgatcttgaaatgttaacggaaactggc
agctgtaaaggcattgaaaactactctcgctttttcacaggacgtagtgccggtgagccg
cctcctacattattcgaatacctaccagaagatgcattattatttgttgatgaaagccat
gtatccgtaccgcaaattagagcgatgtataacggcgatcgagcaaggaaagaagttttg
gtagagcatgggtttcgtctaccctctgcacttgataacagacctttaaaatttgaagaa
tgggaaaaattgagaccacaaactgtgtttgtatctgcaactccaggaccgttcgagtta
gaagaaaccggcggcacggttgtagaattgattatcagacctacggggctgcttgatcct
gaatgtattatcaaacctgctactaaccaagttgaggatttaattagcgaaattcaaacc
actatcgctaaaggttttcgtgttctagtcaccaccttaactaaaaaaatggcagaagat
ttaaccgcctatttgcaggagctaaaatataaaacttcttatttacattctaacgttcat
actctagagcgtatagagattttacgagatttaaggcaaggtactattgatattttagtc
ggtattaatctattaagggaggggcttgacctccctgaatgcggcttagttgctatactt
gatgcagacaaagaggggtttttgcggtcggaagtatcgttaatacaaacaataggaaga
gctgcaagaaatagcgagggtagagttatactttatgccgataaaatgactatgtctatc
gataaagccgttagtgaaacgttgcgtagaaggcaaattcagcaggaatataatgaaaaa
cacggcataattccaaaaaccatcaaccgtactattcacactttagcagaatttgagaaa
atcgatagtaaacttgataaaaaacaagctcatactttatttgataatcctgctaagcta
aaaacccatattgataaattaaagaaagaaatgcttaaagccgcaagtaatcttgaattt
gaacaagccgcaaaacttcgtgatcagctaaaaactctagaagaggcagcactcgagttg
agttaa
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