Rickettsia amblyommatis GAT-30V: MCE_03065
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Entry
MCE_03065 CDS
T01787
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ram
Rickettsia amblyommatis GAT-30V
Brite
KEGG Orthology (KO) [BR:
ram00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ram03032
]
MCE_03065
03400 DNA repair and recombination proteins [BR:
ram03400
]
MCE_03065
Enzymes [BR:
ram01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MCE_03065
DNA replication proteins [BR:
ram03032
]
Prokaryotic type
DNA Topoisomerases
MCE_03065
DNA repair and recombination proteins [BR:
ram03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MCE_03065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_C_rpt
Zn_ribbon_Top1
WHD_POLR3C
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AFC69562
UniProt:
H8K4W8
LinkDB
All DBs
Position
complement(533847..536186)
Genome browser
AA seq
779 aa
AA seq
DB search
MKLVIVESPAKAKTINKYLGDEFKVIASFGHIRDLPSKKGSVLPDENFAMKYDISDKAGK
YVDTIVKDAKKADAVYLATDPDREGESISWHVAEVIKEKNQVKSDDFFKRVAFNEITKKA
IIHAVENPRKLDTNLVNAQQARRALDYLVGFTLSPLLWRKLPGCKSAGRVQSVALRLICE
REDEIERFKSEEYWDISLKMQNSNNELFTAKLTHVNDQKLEKFSIINEKNAKDLTEKLKS
QKFHVDKIEKKQQKRQPQPPFITSSLQQEAARKLGFSAKKTMQIAQKLYEGVDIGKETIG
LITYMRTDGITLSNDAIADIRKLIDKSYGDKYLPTSPRIYKSKVKNAQEAHEAIRPTNIT
YTPDSLKEKLEKDYYKLYELIWKRTIACQMKNVIMDLVVANLASENKEYLAKANGSTIAF
DGFYKVYRESVDDEAEEENKMLPPLKEQEPLKTKEVIPNQHFTEPPPRYSEASLVKKLEE
LGIGRPSTYASILSVLQDRKYVALEKKRFIPEELGRLVTVFLVGFFKKYVEYDFTAGLEN
ELDEIAAGKLEWKAALNNFWSSFNHNIESVNEQKITEIISYVQKALDYHLFGENKESKVC
PSCNTGELSLKLGKFGAFLACSNYPECTFRKSIVSGNNNNENEGEPTAMPNENKVLGTDK
DGVEIYLKKGPYGPYIQLGEQEGKVKPKRSPVPASLNQNDITLDIALKLLSLPLKIGIHK
DSDEEIIIGYGKFGPYIKYMGKFISVQKKYDFLNLSLDDAMKLIEENKAKLKKKQASMV
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagtaatagtagaatcgccggcaaaggcaaaaacaataaataaatatttaggt
gatgagtttaaggtcattgcatcattcggtcatattagagatttaccttctaaaaaaggc
tcggtgttacctgatgaaaattttgcaatgaaatatgatatttccgataaagccggtaaa
tatgtagataccatagttaaagatgctaaaaaagctgatgcagtatatcttgcaaccgat
cctgatcgtgagggtgaatctatctcatggcatgttgcagaggtaataaaagaaaagaat
caagttaaatccgatgattttttcaaaagggtagcatttaacgaaatcactaaaaaagca
attattcatgcagttgaaaaccctaggaaacttgacactaacttagtaaatgcccaacaa
gcaagaagagctttagactatttagtcggctttaccctttcacctcttttatggcgtaag
ttaccgggatgtaaatcggcaggacgtgtgcagtccgtggctctacgattaatatgtgag
cgagaagatgaaatagagcgttttaagtcagaagaatattgggatattagccttaaaatg
caaaatagtaataacgaactatttactgctaaattgactcacgtaaacgatcagaagtta
gaaaaattctcaattattaacgaaaaaaacgccaaagatttaaccgaaaaattaaaatct
caaaaatttcatgttgataagatagaaaaaaaacaacaaaaacgtcaaccacaacctcct
tttattacttcatcactacaacaagaagcagcaagaaaattaggttttagtgctaaaaag
actatgcaaatagcacaaaaactttatgagggtgttgatataggtaaggaaactataggg
cttattacttatatgagaaccgacggcattacattatcaaatgatgcaatagcagatata
cgtaagttaatcgataaaagttacggcgataaatatttaccaactagccctagaatttat
aaatccaaagtaaaaaatgctcaagaagctcatgaagcaataagacccacaaatattact
tatactcctgatagcttaaaagaaaagctagaaaaggattattataagctttatgagttg
atttggaaaagaactatagcctgccaaatgaaaaatgttataatggatttggtagttgca
aatttagcttcggaaaataaagaatatttggcaaaagcaaacggatcgactatagccttt
gacggattttataaggtttatcgtgaaagtgtggacgatgaagctgaagaagaaaataaa
atgcttccgcctttaaaagaacaagagccacttaaaactaaagaagttattccaaatcaa
cattttaccgaaccgcctccaagatattcagaagcaagtttagtgaaaaaacttgaagag
cttgggatcggtcgtccttcgacctatgctagtattttatcggttttacaagatcgaaaa
tatgttgctcttgagaaaaaacgatttatacctgaagagcttggacgtttggtaacagta
tttttagtcggtttcttcaaaaaatacgttgaatatgattttactgcaggacttgaaaac
gaattagacgaaatagcagccggcaaacttgaatggaaagctgctttaaataatttttgg
agcagttttaaccataatattgaatcagtaaacgagcagaaaataaccgagattattagc
tatgtacagaaagcccttgattatcacttgttcggtgagaataaagaatctaaagtttgt
ccttcatgtaacacgggcgagcttagcttaaagcttggtaagttcggagcgtttttagca
tgtagtaattaccctgaatgtacttttagaaaatctattgttagcggtaacaataataac
gagaatgaaggcgagcctaccgctatgcctaatgagaataaagttttaggtacggataaa
gacggagtagaaatatatctgaaaaaaggaccttacggaccttatattcaacttggcgaa
caagaaggcaaagtaaagccgaaacgtagccccgtgcctgctagcttgaaccaaaatgat
attacacttgatatagcattaaagcttctaagcttaccgctaaaaataggtattcataaa
gatagcgacgaggaaattattataggatacggtaaattcggtccttacataaaatatatg
ggtaaatttatttcggtgcaaaaaaaatatgattttctaaatttaagcttagatgatgcg
atgaagctaattgaagagaataaagcgaaattaaagaagaaacaagcgtcaatggtttag
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integrated database retrieval system
