Rickettsia amblyommatis GAT-30V: MCE_04230
Help
Entry
MCE_04230 CDS
T01787
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ram
Rickettsia amblyommatis GAT-30V
Pathway
ram03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ram00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCE_04230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ram03019
]
MCE_04230
03016 Transfer RNA biogenesis [BR:
ram03016
]
MCE_04230
Enzymes [BR:
ram01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MCE_04230
Messenger RNA biogenesis [BR:
ram03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MCE_04230
Transfer RNA biogenesis [BR:
ram03016
]
Prokaryotic type
tRNA degradation factors
MCE_04230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_RRP5
KH_DUF2096_C
KH_2
OB_PDCD11
Motif
Other DBs
NCBI-ProteinID:
AFC69752
UniProt:
H8K5F8
LinkDB
All DBs
Position
complement(735765..738011)
Genome browser
AA seq
748 aa
AA seq
DB search
MFNEITKSITWNGKVLELSTGKIARQADGAVTVKMGNSVLLCTAVVANKAKEGIGFFPLT
INYREMAYAAGKIPGGFFKREGKASDREVLVSRLIDRPIRPLFHPAFVNETHVTCSVLSY
DPETPVDILAIIGASAALSLSPAPYLEIVAASKVGLINGEFVLNPTLELLKTSQLDLVVA
GTSDSVMMVESEAYLRSEEQMLEAVKFGFESFQPVIKIIKELAEEAKKPKLEMQDLYPAS
LKKEIEKLFVKEIEQAFAIKSRQERSTNLDLILGKVLTHFVSDIENKKYSNYQIESALKA
IESDILRNEILEKNRRIDGRSTTDIRQIACEIGLLPSAHGSALFTRGETQSLVSTTFGTS
LDEQIVDSLEGEYKERFMLNYIFPPYSVNEAMPMKAPSRREVGHGKLALRAINPILPNKV
QFPYSIRVVAETTESNGSSSMATVCGSSLALMYAGVPIKAQVAGIAMGLVKEGKKFAVLS
DILGDEDYFGDMDFKVAGTSEGITALQMDIKISGVDFKIMKVALEQARLGRLHILEQMNK
VISKPNNELSKNAPSTTTIKIDKDKIRDIIGPGGKVIKEICETSGAKIDISDDGTVSVYA
SDRDKLKVALDKIKAIAVEPEIGEIFNGTVMKVLDSGAFINYLGNKDGFVHISEVSEERI
ETVSSVLKQGDIVKVKLIGFDNKGKAKLTIKNADKDKASNNTKPKTNVNNAKDNSEPEQR
RDSSKKRAWNEDNNAETAEVITERKYFN
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacgaaataactaagagtattacatggaacgggaaagttcttgagcttagtaca
ggtaaaatagcaaggcaagctgacggggcagttacggtaaaaatgggtaattccgtttta
ctatgtacggcagtagtagctaacaaagcaaaagagggtataggtttttttcctttaaca
attaattatagagaaatggcatatgctgccggtaagataccagggggattttttaaacgt
gagggaaaagcatcagatagagaagttttagtatctcgtttaatagatagaccgattaga
ccattatttcatccggcttttgtgaatgaaacgcatgtaacttgcagtgttctttcatat
gatcctgaaactccggtagatatacttgcaattatcggtgcatcggctgcacttagccta
tcccctgctccttatctagaaatagttgcggcaagtaaagtaggtttaatcaatggtgaa
tttgttttaaatccaacacttgaattattaaaaacaagtcagcttgatttagtagttgca
ggaacatcagattcagtaatgatggttgaatcggaagcttatttacgctctgaagaacaa
atgttagaagccgtaaaatttggatttgaaagctttcagccggtaataaagataattaaa
gaactagcagaagaagctaaaaaaccaaaacttgaaatgcaagatttatatcctgcttca
ttaaagaaagaaattgagaagttatttgtaaaagaaattgaacaagcttttgcaattaaa
tctagacaagaacgtagcactaatttagatttaatacttggaaaagttcttacacatttt
gtaagcgacatagaaaataaaaaatatagtaattatcaaatcgaatcagctttaaaagct
attgaatcagatatattacgtaacgagattttagaaaaaaatagacgtatcgatggaaga
agtaccacggatataagacaaattgcttgtgaaataggtttactaccttccgcacatggt
tcagctttatttactagaggtgaaacgcaaagcttagttagtactacattcggtactagt
ttagatgagcagatagttgacagtttagagggtgagtataaagagcgttttatgctcaat
tatatctttccgccctactctgtaaatgaagcaatgcctatgaaagcacctagtcgtcgt
gaagtcggacacggtaaactcgcattgcgtgctattaatccaatattacctaataaagta
caatttccttattctattagagtagttgccgaaactacggagtctaacggttcttcttca
atggcaactgtttgcggtagctctcttgctttaatgtatgccggcgtaccgataaaagca
caggttgcgggtattgctatgggacttgttaaggaaggcaaaaaatttgccgtattatcg
gatattctcggcgatgaagattatttcggtgatatggactttaaggttgcaggaactagc
gaagggattactgcattacaaatggatatcaaaatatccggagtagattttaaaataatg
aaagtagctttagagcaagcacgactcggtcgtttgcatatactggagcaaatgaataaa
gttatcagtaaaccaaataacgaactaagtaaaaatgctccttctactactactataaaa
atagataaggataaaattagagatattataggaccaggcggtaaagtaataaaggaaatt
tgtgaaactagcggtgctaaaatagatataagcgatgacggtacggtgtctgtttatgct
tcagatagagataagctaaaagttgccttagataaaattaaagctattgccgttgaacct
gaaatcggtgaaatatttaacggtacggtaatgaaagtcttagattccggtgcttttatt
aattatttaggtaataaagacggctttgttcatattagtgaagtttcagaagaaagaata
gaaacggttagcagtgttttaaaacaaggcgatatagtaaaagtgaagctaataggcttt
gataataaaggcaaggcaaaattaactattaaaaatgctgataaagataaagcttcaaat
aatacaaagccaaaaactaatgttaataatgctaaggacaattcagaacctgagcagcga
cgtgattctagtaaaaaacgagcttggaatgaagataataatgctgaaactgctgaagta
attacagaacgtaagtattttaattga
DBGET
integrated database retrieval system
