Rickettsia amblyommatis GAT-30V: MCE_04455
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Entry
MCE_04455 CDS
T01787
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ram
Rickettsia amblyommatis GAT-30V
Pathway
ram03410
Base excision repair
ram03430
Mismatch repair
ram03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ram00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MCE_04455
03430 Mismatch repair
MCE_04455
03440 Homologous recombination
MCE_04455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ram03400
]
MCE_04455
DNA repair and recombination proteins [BR:
ram03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MCE_04455
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MCE_04455
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MCE_04455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AFC69790
UniProt:
H8K5J6
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All DBs
Position
774059..775822
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AA seq
587 aa
AA seq
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MKPQASINGKIWQQKLINEDIVTELCRSFKISDLLARIVSLRVNNLEEVENFLIPKIKNL
LPDPFHLLDMKKAVDRTVTAILNNQKICIFADYDVDGATSAALLKNIFRDLNMLCDIYVP
DRIAEGYGPTPFAMQKIKDNGTELLITVDCGTMAHEALKYAKDVNLDVIVIDHHIAPEIL
PDAVAIVNPNRIDEKSEYKHLAAVGVAFLFATAILSNLKKQNYFTQTMLQPNLMKYLDLV
ALGTVCDMMKLTGLNRAFVASGLKVMQQRQNIGIKTLYDMVGLNEIPKCYHLGFILGPRI
NAGGRVGKSSLGANLLSTSCSNEANKLAAELEKHNNERKVIELLMIEEAMEIALTQQDSS
LLFIVKEGWHPGVIGIVASKLKEKFDKPVAVIALNDGIGKASCRSILGIDFGAEIINAKS
KDLLIAGGGHAMAAGFTVTAEKLQELQNFFNNAFRISINKLENYKHAEYDIDLTVNSVNF
PLMEELNTLEPFGQGNHKPIFKFDDLFVLKADIVGSKHIKCILVPNKQGFGNKALSAIAF
NSVGTAFEDVLLSPKAKNIAAIGTLKTNNWQDNYTIQLIIKDILLKE
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccacaagcatctataaacggtaaaatctggcagcagaaactgattaacgaagat
atagtcaccgagttatgtcgtagtttcaaaattagtgatttacttgctaggatagtatca
ttaagagtaaataatctagaggaagtagaaaattttttgataccgaaaatcaaaaattta
ttacctgatccttttcatctgcttgatatgaaaaaggctgtagatagaaccgttacagct
attttaaataaccaaaaaatatgtatctttgccgattatgatgtagacggtgctacttca
gccgctttacttaaaaatatttttagagatttaaatatgctatgtgatatttatgttccc
gatcgtatagctgaaggatacggtccaactccttttgctatgcaaaaaattaaagataac
ggcacagaattattaattacggttgattgcggtactatggcacatgaagccctaaaatac
gcaaaagacgttaaccttgatgttatagtaatcgatcatcatatagctccggaaatatta
ccggatgcagtagctatagtaaatccaaatcgtattgatgaaaaaagcgaatataaacat
ttggcagccgtaggagttgctttcttatttgcaactgcaatattatcgaatttaaagaag
caaaattatttcacgcaaacaatgcttcagcctaatctaatgaagtatctagatttagtg
gctcttggtactgtttgcgatatgatgaaattaacaggcttaaatcgtgcatttgttgca
agcggattgaaagtaatgcaacaaaggcaaaatatagggattaaaacattatatgatatg
gtagggcttaatgaaataccaaaatgttatcatttagggtttattctaggtccgcgtatc
aatgcgggcggtagagtaggaaagtcaagtttaggggctaatctcctatctactagttgt
tctaatgaagcaaataaattagctgcagaacttgaaaaacataataatgagcgtaaagta
attgagttattaatgatagaagaagcgatggaaattgctttgacacaacaagatagtagt
ttattatttatcgtaaaagaaggatggcatccaggcgttataggaatcgttgccagcaaa
ttaaaagaaaaatttgataagccggtggcagttatagctttaaatgacgggattggtaaa
gcttcatgccgttctattttaggtattgattttggtgctgaaattatcaatgctaaaagc
aaagatttgctaatagcaggtggaggtcatgctatggcggcaggttttaccgtaactgct
gaaaaattacaagaattgcagaatttttttaataatgcttttagaattagtataaataaa
ctagaaaattataagcatgcggaatatgatattgatttaacggttaatagtgtgaatttc
cctttaatggaggaattaaacactttagagcctttcggtcaaggaaatcataagcctata
tttaaattcgatgatttatttgtattaaaagcggatatcgttggaagtaagcatattaaa
tgtatacttgttccaaataagcaaggctttggtaataaagccttatctgctattgctttt
aattcggtaggaactgcatttgaagatgttttattaagccctaaagcaaaaaatattgcc
gcaataggaacgttaaaaactaataattggcaagataattatactattcaattaattata
aaagatatacttctaaaagagtag
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